Gene detail information of Glyur000175s00012028.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22730.10Leucine-rich repeat protein kinase family protein
NRXP_003550887.10PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g63930-like [Glycine max]
COGYP_004163701.11.00E-28hypothetical protein [Cellulophaga algicola DSM 14237]
Swissprottr|C0LGQ5|GSO1_ARATH2.00E-70LRR receptor-like serine/threonine-protein kinase GSO1 (Precursor)
trEMBLtr|I1MUU4|I1MUU4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G14390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001752837932174-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000175s00012028.1PF08263.7LRRNT_226664.90E-08
Glyur000175s00012028.1PF07714.12Pkinase_Tyr4036655.40E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.943
SRR1783600control12.044
SRR1783602moderate drought stress8.223
SRR1811619moderate drought stress8.272

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.332
DRR006520Root Summer glycyrrhizin high producing strain17.150
DRR006521Root Winter glycyrrhizin high producing strain6.394
DRR006522Root Winter glycyrrhizin high producing strain6.310
DRR006523Root Summer glycyrrhizin low producing strain34.022
DRR006524Root Summer glycyrrhizin low producing strain34.126
DRR006525Leaf Summer glycyrrhizin high producing strain4.332
DRR006526Leaf Summer glycyrrhizin high producing strain4.307

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)13.873
SRR2868004Drought Stress(Tissue:root)15.975
SRR2967015Control (Tissue:root)12.899

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave5.035
SRR9715740Leave4.262
SRR9715741Leave5.747
SRR9715739Root4.880
SRR9715742Root21.925
SRR9715743Root18.029

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.696
SRR8749028MeJA induced 9h7.020
SRR8749029MeJA induced 9h6.194
SRR8749030Uninduced3.925
SRR8749031Uninduced0.617
SRR8749032Uninduced0.646

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.218
SRR8400027Control-Root16.704

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved