Gene detail information of Glyur000175s00012049.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G01800.13.00E-93NAD(P)-binding Rossmann-fold superfamily protein
NRXP_006583331.11.70E-175PREDICTED: (+)-neomenthol dehydrogenase-like isoform X1 [Glycine max]
COGYP_643299.13.00E-46short-chain dehydrogenase/reductase SDR [Rubrobacter xylanophilus DSM 9941]
Swissprottr|Q9M2E2|SDR1_ARATH2.00E-122(+)-neomenthol dehydrogenase
trEMBLtr|I1KIE8|I1KIE8_SOYBN6.00E-176Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G08090.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00175105054107324+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15095E1.1.1.208 EC:1.1.1.208 Monoterpenoid biosynthesis map00902


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000175s00012049.1PF00106.20adh_short91741.50E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.006
SRR1783600control5.175
SRR1783602moderate drought stress4.371
SRR1811619moderate drought stress4.265

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.137
DRR006520Root Summer glycyrrhizin high producing strain5.137
DRR006521Root Winter glycyrrhizin high producing strain12.171
DRR006522Root Winter glycyrrhizin high producing strain12.403
DRR006523Root Summer glycyrrhizin low producing strain4.859
DRR006524Root Summer glycyrrhizin low producing strain4.855
DRR006525Leaf Summer glycyrrhizin high producing strain32.463
DRR006526Leaf Summer glycyrrhizin high producing strain33.405

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.598
SRR2868004Drought Stress(Tissue:root)1.872
SRR2967015Control (Tissue:root)2.207

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.778
SRR9715740Leave48.868
SRR9715741Leave6.759
SRR9715739Root4.539
SRR9715742Root11.958
SRR9715743Root9.541

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.158
SRR8749028MeJA induced 9h0.214
SRR8749029MeJA induced 9h0.212
SRR8749030Uninduced0.035
SRR8749031Uninduced0.084
SRR8749032Uninduced0.270

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.815
SRR8400027Control-Root11.532

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved