Gene detail information of Glyur000176s00012091.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G69010.1 | 6.00E-40 | BES1-interacting Myc-like protein 2 |
| NR | AFK40942.1 | 2.56E-169 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9CAA4|BIM2_ARATH | 1.00E-46 | Transcription factor BIM2 |
| trEMBL | tr|I3SL00|I3SL00_LOTJA | 1.00E-169 | Uncharacterized protein {ECO:0000313|EMBL:AFK40942.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00176 | 34874 | 38291 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000176s00012091.1 | PF00010.21 | HLH | 73 | 105 | 7.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.530 |
| SRR1783600 | control | 14.698 |
| SRR1783602 | moderate drought stress | 16.879 |
| SRR1811619 | moderate drought stress | 16.838 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.968 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.230 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.865 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.230 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.127 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.179 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.970 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 18.454 |
| SRR2868004 | Drought Stress(Tissue:root) | 21.343 |
| SRR2967015 | Control (Tissue:root) | 23.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.698 |
| SRR9715740 | Leave | 16.599 |
| SRR9715741 | Leave | 15.060 |
| SRR9715739 | Root | 3.921 |
| SRR9715742 | Root | 7.551 |
| SRR9715743 | Root | 7.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.206 |
| SRR8749028 | MeJA induced 9h | 8.111 |
| SRR8749029 | MeJA induced 9h | 6.417 |
| SRR8749030 | Uninduced | 11.318 |
| SRR8749031 | Uninduced | 5.574 |
| SRR8749032 | Uninduced | 4.467 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 22.364 |
| SRR8400027 | Control-Root | 20.202 |