Gene detail information of Glyur000176s00012114.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24310.1 | 4.00E-35 | myb domain protein 305 |
| NR | NP_001240937.1 | 1.01E-75 | uncharacterized protein LOC100785540 [Glycine max] |
| Swissprot | tr|Q9LX82|MYB48_ARATH | 8.00E-33 | Transcription factor MYB48 |
| trEMBL | tr|C6TMY9|C6TMY9_SOYBN | 4.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G27660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00176 | 166540 | 167996 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000176s00012114.1 | PF00249.26 | Myb_DNA-binding | 16 | 64 | 1.90E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.557 |
| SRR1783600 | control | 0.597 |
| SRR1783602 | moderate drought stress | 2.209 |
| SRR1811619 | moderate drought stress | 2.262 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.125 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.115 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.152 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.454 |
| SRR2967015 | Control (Tissue:root) | 1.429 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.039 |
| SRR9715742 | Root | 0.657 |
| SRR9715743 | Root | 0.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.239 |
| SRR8749029 | MeJA induced 9h | 0.014 |
| SRR8749030 | Uninduced | 0.358 |
| SRR8749031 | Uninduced | 2.295 |
| SRR8749032 | Uninduced | 0.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 5.271 |
| SRR8400027 | Control-Root | 2.769 |