Gene detail information of Glyur000176s00012124.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G15650.10reversibly glycosylated polypeptide 2
NRXP_003552602.10PREDICTED: UDP-arabinopyranose mutase 1-like [Glycine max]
COGYP_006541505.12.00E-17Alpha-1,4-glucan-protein synthase, UDP-forming [Natrinema sp. J7-2]
Swissprottr|Q8H8T0|RGP1_ORYSJ0UDP-arabinopyranose mutase 1
trEMBLtr|I1N4P7|I1N4P7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G50780.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00176219913222907+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT75


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13379RGP, UTM EC:2.4.1.- 5.4.99.30 Amino sugar and nucleotide sugar metabolism map00520


Gene Ontology

biological_process

GO:0030244  cellulose biosynthetic process


molecular_function

GO:0016866  intramolecular transferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000176s00012124.1PF03214.8RGP13422.50E-173


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.705
SRR1783600control58.548
SRR1783602moderate drought stress17.097
SRR1811619moderate drought stress16.844

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain44.425
DRR006520Root Summer glycyrrhizin high producing strain43.983
DRR006521Root Winter glycyrrhizin high producing strain100.972
DRR006522Root Winter glycyrrhizin high producing strain98.734
DRR006523Root Summer glycyrrhizin low producing strain46.147
DRR006524Root Summer glycyrrhizin low producing strain45.276
DRR006525Leaf Summer glycyrrhizin high producing strain155.438
DRR006526Leaf Summer glycyrrhizin high producing strain154.555

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)74.005
SRR2868004Drought Stress(Tissue:root)30.492
SRR2967015Control (Tissue:root)34.301

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave220.853
SRR9715740Leave225.358
SRR9715741Leave273.288
SRR9715739Root26.647
SRR9715742Root35.299
SRR9715743Root28.137

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h143.436
SRR8749028MeJA induced 9h100.491
SRR8749029MeJA induced 9h85.788
SRR8749030Uninduced35.285
SRR8749031Uninduced9.512
SRR8749032Uninduced18.082

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root42.488
SRR8400027Control-Root43.136

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved