Gene detail information of Glyur000176s00012132.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G54380.1 | 8.00E-61 | protein kinase family protein |
| NR | KHN13536.1 | 9.95E-116 | Receptor-like protein kinase ANXUR2 [Glycine soja] |
| COG | YP_003718458.1 | 1.00E-13 | hypothetical protein HMPREF0573_10645 [Mobiluncus curtisii ATCC 43063] |
| Swissprot | tr|Q9LK35|THE1_ARATH | 3.00E-66 | Receptor-like protein kinase THESEUS 1 (Precursor) |
| trEMBL | tr|C6ZRP3|C6ZRP3_SOYBN | 2.00E-115 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G50860.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00176 | 261679 | 271517 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.3.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000176s00012132.1 | PF07714.12 | Pkinase_Tyr | 176 | 442 | 6.40E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.374 |
| SRR1783600 | control | 5.613 |
| SRR1783602 | moderate drought stress | 2.194 |
| SRR1811619 | moderate drought stress | 2.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 20.350 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.220 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 12.238 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.202 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 14.904 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.117 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 40.536 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 44.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.999 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.714 |
| SRR2967015 | Control (Tissue:root) | 7.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.190 |
| SRR9715740 | Leave | 3.250 |
| SRR9715741 | Leave | 10.210 |
| SRR9715739 | Root | 1.092 |
| SRR9715742 | Root | 4.562 |
| SRR9715743 | Root | 4.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.816 |
| SRR8749028 | MeJA induced 9h | 13.426 |
| SRR8749029 | MeJA induced 9h | 15.070 |
| SRR8749030 | Uninduced | 16.357 |
| SRR8749031 | Uninduced | 18.088 |
| SRR8749032 | Uninduced | 12.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.967 |
| SRR8400027 | Control-Root | 6.813 |