Gene detail information of Glyur000177s00010892.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G24120.1 | 2.00E-52 | Homeodomain-like superfamily protein |
| NR | XP_007144235.1 | 0 | hypothetical protein PHAVU_007G139300g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SAK5|APL_ARATH | 2.00E-44 | Myb family transcription factor APL |
| trEMBL | tr|V7BEH4|V7BEH4_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW16229.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00177 | 44682 | 48186 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | G2-like |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000177s00010892.1 | PF00249.26 | Myb_DNA-binding | 41 | 92 | 8.90E-20 |
| Glyur000177s00010892.1 | PF14379.1 | Myb_CC_LHEQLE | 134 | 180 | 3.60E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.061 |
| SRR1783600 | control | 10.718 |
| SRR1783602 | moderate drought stress | 11.244 |
| SRR1811619 | moderate drought stress | 11.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.326 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.912 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.623 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.428 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.300 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.229 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 14.225 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.995 |
| SRR2868004 | Drought Stress(Tissue:root) | 11.640 |
| SRR2967015 | Control (Tissue:root) | 15.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 6.852 |
| SRR9715740 | Leave | 6.383 |
| SRR9715741 | Leave | 7.235 |
| SRR9715739 | Root | 7.208 |
| SRR9715742 | Root | 5.873 |
| SRR9715743 | Root | 5.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.760 |
| SRR8749028 | MeJA induced 9h | 6.260 |
| SRR8749029 | MeJA induced 9h | 6.262 |
| SRR8749030 | Uninduced | 1.061 |
| SRR8749031 | Uninduced | 0.718 |
| SRR8749032 | Uninduced | 1.546 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 24.454 |
| SRR8400027 | Control-Root | 21.258 |