Gene detail

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Gene detail information of Glyur000177s00010912.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G17690.1	7.00E-106	Peroxidase superfamily protein
NR	XP_004496140.1	0	PREDICTED: peroxidase 65-like [Cicer arietinum]
Swissprot	tr\|Q9FJR1\|PER65_ARATH	2.00E-132	Peroxidase 65 (Precursor)
trEMBL	tr\|G8A1G9\|G8A1G9_MEDTR	0	4-coumarate-CoA ligase-like protein {ECO:0000313\|EMBL:AES85307.1}

Sequence

Transcript Sequence

>Glyur000177s00010912.1
ATGGCTTTCCCTATCCTCTTCCTTCTCTTCCTTTCCCTTCCCTTCTCCTCTCATGCCAAGCTCAACATTGACTACTACAAGAAAACATGCCCTGACTTTGAAAAGATTGTGAGGGAAAACATNTTCACAAAGCAAAGCTCAAGCCCCACCACAGCACCTGGCATACTTCGCCTCTTCTTCCATGATTGCATCACTGATGGGTGTGATGCCTCAATCCTCATCACCTCCAATGCCTACACCCCACATGCTGAGAGGGATGCTGACTTGAACCTTTCACTCTCTGGTGATGCCTTTGACATCATTAACAAGATCAAGAATGCCCTGGAGCTTGCATGCCCTGGGATTGTGTCCTGTTCTGACATTGTTGCACAGGCCACAAGGGACCTTGTCAAGATGGTTGGTGGACCNTTTTACCCTGTCAGGTTGGGCAGAAAGGATAGCCTCGAATCAGATGCTAAAAAGGTTGATGCTAGCGTCCCAAGGCCAAACATGACCATGGATGATATCATTAAAAGGTTTACCACAAAGAACTTCACTATTAGAGAGATGGTGGCCTTGACTGGTGCACACACCATTGGGTTCACCCACTGTGTTGAATTCAGCAACAGGATCTTCAACTTCAGCAAGACCCAAGAGGTTGACCCAACCCTTCACCCAAAGCTGGCTGAGGGGCTAAGGCATATGTGCAAGAACTACACTTCTGACCCAACAATGGCAGCCTTTAATGATGTGAGGTCACCTGGCAAGTTTGACAATGCTTATTTCAACAATGTGCTCAAGGGATTGGGCCTCTTGACCTCTGATTACCTCCTTGGTGTTGACCCAAGGACAAGGCCCATTGTGGAACAATATGCAAAAGATGAGCAAGCTTTCTTCCATGACTTTGCNAAGGCAATGGAGAAACTCTCTGTGTTTGGAGTCAAGACTGGCAAGAAAGGAGAGGTTAGGAGCAGGTGTGACCAGTTCAACCGCATCCAGCTTGCATAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00177	149574	150965	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function GO:0004601 peroxidase activity GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000177s00010912.1	PF00141.18	peroxidase	44	287	3.40E-70

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.074
SRR1783600	control	0.074
SRR1783602	moderate drought stress	0.039
SRR1811619	moderate drought stress	0.038

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.104
DRR006520	Root Summer glycyrrhizin high producing strain	0.109
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.186
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.089

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.733
SRR2868004	Drought Stress(Tissue:root)	0.253
SRR2967015	Control (Tissue:root)	0.462

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.169
SRR9715740	Leave	0.570
SRR9715741	Leave	0.051
SRR9715739	Root	0.000
SRR9715742	Root	0.000
SRR9715743	Root	0.248

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.282
SRR8749028	MeJA induced 9h	0.109
SRR8749029	MeJA induced 9h	0.304
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.028

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.156
SRR8400027	Control-Root	0.118