Gene detail information of Glyur000177s00010925.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G01630.10O-Glycosyl hydrolases family 17 protein
NRXP_004498268.10PREDICTED: glucan endo-1,3-beta-glucosidase 3-like [Cicer arietinum]
Swissprottr|Q9ZU91|E133_ARATH0Glucan endo-1,3-beta-glucosidase 3 (Precursor)
trEMBLtr|I1JD38|I1JD38_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G07730.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00177217262221279-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH17,CBM43


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19891GN1_2_3 EC:3.2.1.39 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000177s00010925.1PF00332.13Glyco_hydro_17233435.00E-87
Glyur000177s00010925.1PF07983.8X83604304.90E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.359
SRR1783600control1.446
SRR1783602moderate drought stress1.217
SRR1811619moderate drought stress1.207

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.564
DRR006520Root Summer glycyrrhizin high producing strain0.458
DRR006521Root Winter glycyrrhizin high producing strain0.046
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.267
DRR006524Root Summer glycyrrhizin low producing strain0.221
DRR006525Leaf Summer glycyrrhizin high producing strain0.739
DRR006526Leaf Summer glycyrrhizin high producing strain0.721

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)7.069
SRR2868004Drought Stress(Tissue:root)4.059
SRR2967015Control (Tissue:root)4.001

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.349
SRR9715740Leave0.256
SRR9715741Leave0.673
SRR9715739Root0.929
SRR9715742Root0.966
SRR9715743Root1.175

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.902
SRR8749028MeJA induced 9h1.142
SRR8749029MeJA induced 9h0.888
SRR8749030Uninduced0.222
SRR8749031Uninduced0.138
SRR8749032Uninduced0.170

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.880
SRR8400027Control-Root5.468

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved