Gene detail information of Glyur000178s00013190.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G19210.13.00E-38Integrase-type DNA-binding superfamily protein
NRNP_001238500.11.89E-94dehydration-responsive element binding protein 3 [Glycine max]
Swissprottr|Q84QC2|ERF17_ARATH3.00E-53Ethylene-responsive transcription factor ERF017
trEMBLtr|Q2VEU3|Q2VEU3_SOYBN7.00E-95Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G05240.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001787204872671+


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000178s00013190.1PF00847.15AP215653.50E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.519
SRR1783600control0.525
SRR1783602moderate drought stress0.693
SRR1811619moderate drought stress0.667

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain286.837
DRR006520Root Summer glycyrrhizin high producing strain275.924
DRR006521Root Winter glycyrrhizin high producing strain0.358
DRR006522Root Winter glycyrrhizin high producing strain0.312
DRR006523Root Summer glycyrrhizin low producing strain81.395
DRR006524Root Summer glycyrrhizin low producing strain80.633
DRR006525Leaf Summer glycyrrhizin high producing strain295.154
DRR006526Leaf Summer glycyrrhizin high producing strain293.758

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.200
SRR2868004Drought Stress(Tissue:root)16.997
SRR2967015Control (Tissue:root)291.480

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave760.864
SRR9715740Leave772.698
SRR9715741Leave723.631
SRR9715739Root238.694
SRR9715742Root358.909
SRR9715743Root334.251

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.676
SRR8749028MeJA induced 9h20.525
SRR8749029MeJA induced 9h6.634
SRR8749030Uninduced13.956
SRR8749031Uninduced5.011
SRR8749032Uninduced23.739

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.321
SRR8400027Control-Root44.119

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved