Gene detail information of Glyur000178s00013199.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G42880.11.00E-172Leucine-rich repeat protein kinase family protein
NRXP_004508012.10PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At5g20690-like [Cicer arietinum]
COGYP_004579826.13.00E-15hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|Q3E991|Y5269_ARATH0Probable inactive leucine-rich repeat receptor-like protein kinase At5g20690 (Precursor)
trEMBLtr|G7JS80|G7JS80_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:AES92178.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00178120342123863+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000178s00013199.1PF08263.7LRRNT_229672.30E-11
Glyur000178s00013199.1PF00560.28LRR_11201420.17
Glyur000178s00013199.1PF00069.20Pkinase3466116.00E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.188
SRR1783600control18.591
SRR1783602moderate drought stress28.288
SRR1811619moderate drought stress27.876

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.862
DRR006520Root Summer glycyrrhizin high producing strain15.710
DRR006521Root Winter glycyrrhizin high producing strain13.426
DRR006522Root Winter glycyrrhizin high producing strain13.410
DRR006523Root Summer glycyrrhizin low producing strain12.951
DRR006524Root Summer glycyrrhizin low producing strain13.137
DRR006525Leaf Summer glycyrrhizin high producing strain5.820
DRR006526Leaf Summer glycyrrhizin high producing strain5.891

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.893
SRR2868004Drought Stress(Tissue:root)10.393
SRR2967015Control (Tissue:root)10.252

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.074
SRR9715740Leave11.426
SRR9715741Leave9.091
SRR9715739Root12.186
SRR9715742Root12.875
SRR9715743Root11.919

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.248
SRR8749028MeJA induced 9h7.829
SRR8749029MeJA induced 9h4.965
SRR8749030Uninduced6.076
SRR8749031Uninduced3.483
SRR8749032Uninduced4.044

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.989
SRR8400027Control-Root18.967

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved