Gene detail information of Glyur000178s00013226.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G06025.1 | 1.00E-80 | Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| NR | XP_003533783.1 | 4.85E-124 | PREDICTED: uncharacterized protein LOC100795426 isoform X1 [Glycine max] |
| COG | YP_007091400.1 | 2.00E-08 | N-acetyltransferase GCN5 [Chroococcidiopsis thermalis PCC 7203] |
| trEMBL | tr|I1L1Q0|I1L1Q0_SOYBN | 2.00E-124 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G08070.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00178 | 249052 | 251192 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GNAT |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000178s00013226.1 | PF00583.19 | Acetyltransf_1 | 207 | 275 | 1.50E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.601 |
| SRR1783600 | control | 4.511 |
| SRR1783602 | moderate drought stress | 4.863 |
| SRR1811619 | moderate drought stress | 4.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.853 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.936 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.647 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.722 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.945 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.257 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.680 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.328 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.543 |
| SRR2967015 | Control (Tissue:root) | 16.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.130 |
| SRR9715740 | Leave | 14.620 |
| SRR9715741 | Leave | 14.530 |
| SRR9715739 | Root | 2.366 |
| SRR9715742 | Root | 6.661 |
| SRR9715743 | Root | 5.597 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.610 |
| SRR8749028 | MeJA induced 9h | 96.491 |
| SRR8749029 | MeJA induced 9h | 87.590 |
| SRR8749030 | Uninduced | 37.927 |
| SRR8749031 | Uninduced | 65.971 |
| SRR8749032 | Uninduced | 83.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.085 |
| SRR8400027 | Control-Root | 11.649 |