Gene detail information of Glyur000178s00013230.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G06050.34.00E-173oxophytodienoate-reductase 3
NRXP_003542357.10PREDICTED: 12-oxophytodienoate reductase 3-like [Glycine max]
COGYP_007515905.19.00E-109NADH-dependent flavin oxidoreductase [Bradyrhizobium oligotrophicum S58]
Swissprottr|Q9FEW9|OPR3_SOLLC012-oxophytodienoate reductase 3
trEMBLtr|I1LY51|I1LY51_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16940.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00178272242275497-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05894OPR EC:1.3.1.42 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000178s00013230.1PF00724.15Oxidored_FMN163633.70E-89


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control25.427
SRR1783600control25.745
SRR1783602moderate drought stress21.581
SRR1811619moderate drought stress21.369

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain85.568
DRR006520Root Summer glycyrrhizin high producing strain82.163
DRR006521Root Winter glycyrrhizin high producing strain5.440
DRR006522Root Winter glycyrrhizin high producing strain5.046
DRR006523Root Summer glycyrrhizin low producing strain36.299
DRR006524Root Summer glycyrrhizin low producing strain36.011
DRR006525Leaf Summer glycyrrhizin high producing strain12.367
DRR006526Leaf Summer glycyrrhizin high producing strain12.655

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)41.673
SRR2868004Drought Stress(Tissue:root)48.655
SRR2967015Control (Tissue:root)46.692

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave217.467
SRR9715740Leave160.955
SRR9715741Leave332.088
SRR9715739Root89.261
SRR9715742Root161.610
SRR9715743Root148.384

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.256
SRR8749028MeJA induced 9h5.352
SRR8749029MeJA induced 9h4.329
SRR8749030Uninduced11.514
SRR8749031Uninduced7.190
SRR8749032Uninduced8.452

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root54.816
SRR8400027Control-Root54.196

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved