Gene detail information of Glyur000179s00010685.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36730.13.00E-48G-box binding factor 1
NRNP_001240983.17.02E-160bZIP transcription factor bZIP115 [Glycine max]
Swissprottr|P42774|GBF1_ARATH3.00E-80G-box-binding factor 1
trEMBLtr|C6T9L6|C6T9L6_SOYBN3.00E-160Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G06550.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0017999589104857+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000179s00010685.1PF07777.6MFMR11593.70E-46
Glyur000179s00010685.1PF00170.16bZIP_12452832.20E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.289
SRR1783600control9.592
SRR1783602moderate drought stress18.909
SRR1811619moderate drought stress18.973

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.965
DRR006520Root Summer glycyrrhizin high producing strain13.979
DRR006521Root Winter glycyrrhizin high producing strain10.204
DRR006522Root Winter glycyrrhizin high producing strain9.796
DRR006523Root Summer glycyrrhizin low producing strain17.152
DRR006524Root Summer glycyrrhizin low producing strain17.122
DRR006525Leaf Summer glycyrrhizin high producing strain10.438
DRR006526Leaf Summer glycyrrhizin high producing strain10.603

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.523
SRR2868004Drought Stress(Tissue:root)24.473
SRR2967015Control (Tissue:root)27.199

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.860
SRR9715740Leave36.328
SRR9715741Leave47.450
SRR9715739Root2.934
SRR9715742Root12.470
SRR9715743Root9.624

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h32.450
SRR8749028MeJA induced 9h36.858
SRR8749029MeJA induced 9h44.734
SRR8749030Uninduced28.824
SRR8749031Uninduced19.516
SRR8749032Uninduced23.953

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.032
SRR8400027Control-Root18.841

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved