Gene detail information of Glyur000179s00010691.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G18470.1 | 3.00E-125 | roline-rich extensin-like receptor kinase 4 |
| NR | KHN00551.1 | 0 | Proline-rich receptor-like protein kinase PERK4 [Glycine soja] |
| COG | YP_828765.1 | 2.00E-15 | serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076] |
| Swissprot | tr|Q9ZNQ8|PERK4_ARATH | 6.00E-164 | Proline-rich receptor-like protein kinase PERK4 |
| trEMBL | tr|I1MNG9|I1MNG9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G25490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00179 | 135260 | 139522 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.6.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000179s00010691.1 | PF07714.12 | Pkinase_Tyr | 202 | 265 | 1.30E-09 |
| Glyur000179s00010691.1 | PF00069.20 | Pkinase | 270 | 410 | 1.10E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.022 |
| SRR1783600 | control | 0.029 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.030 |
| SRR2967015 | Control (Tissue:root) | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.029 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.121 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.002 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.027 |
| SRR8400027 | Control-Root | 0.016 |