Gene detail information of Glyur000179s00010696.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G50660.10Cytochrome P450 superfamily protein
NRAET03943.20cytochrome P450 family 90 protein [Medicago truncatula]
COGYP_007134290.19.00E-60(+)-abscisic acid 8'-hydroxylase [Stanieria cyanosphaera PCC 7437]
Swissprottr|O64989|C90B1_ARATH0Cytochrome P450 90B1
trEMBLtr|G7LEU0|G7LEU0_MEDTR0Cytochrome P450 family 90 protein {ECO:0000313|EMBL:AET03943.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00179169013174920+


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP90B1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09587CYP90B1, DWF4 EC:1.14.13.- Brassinosteroid biosynthesis map00905


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000179s00010696.1PF00067.17p450364695.20E-64


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.433
SRR1783600control0.393
SRR1783602moderate drought stress0.511
SRR1811619moderate drought stress0.480

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.632
DRR006520Root Summer glycyrrhizin high producing strain0.468
DRR006521Root Winter glycyrrhizin high producing strain0.150
DRR006522Root Winter glycyrrhizin high producing strain0.069
DRR006523Root Summer glycyrrhizin low producing strain0.257
DRR006524Root Summer glycyrrhizin low producing strain0.219
DRR006525Leaf Summer glycyrrhizin high producing strain0.814
DRR006526Leaf Summer glycyrrhizin high producing strain0.627

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.191
SRR2868004Drought Stress(Tissue:root)0.559
SRR2967015Control (Tissue:root)0.308

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.846
SRR9715740Leave0.328
SRR9715741Leave0.371
SRR9715739Root0.033
SRR9715742Root0.690
SRR9715743Root0.721

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.128
SRR8749028MeJA induced 9h0.108
SRR8749029MeJA induced 9h0.127
SRR8749030Uninduced0.160
SRR8749031Uninduced0.000
SRR8749032Uninduced0.001

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.321
SRR8400027Control-Root1.426

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved