Gene detail information of Glyur000180s00014052.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G25280.12.00E-75P-loop containing nucleoside triphosphate hydrolases superfamily protein
NRXP_004506607.11.07E-115PREDICTED: adenylate kinase-like isoform X3 [Cicer arietinum]
COGYP_001303255.13.00E-35adenylate kinase [Parabacteroides distasonis ATCC 8503]
Swissprottr|O24464|KCY_PRUAR2.00E-97UMP-CMP kinase {ECO:0000255|HAMAP-Rule:MF_03172}
trEMBLtr|I1L5R2|I1L5R2_SOYBN4.00E-114Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G36680.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001806163265306-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13800CMPK1, UMPK EC:2.7.4.- 2.7.4.14 Pyrimidine metabolism map00240


Gene Ontology

biological_process

GO:0006139  nucleobase-containing compound metabolic process

GO:0006207  'de novo' pyrimidine nucleobase biosynthetic process

GO:0006221  pyrimidine nucleotide biosynthetic process


molecular_function

GO:0004127  cytidylate kinase activity

GO:0005524  ATP binding

GO:0009041  uridylate kinase activity

GO:0019205  nucleobase-containing compound kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000180s00014052.1PF00406.17ADK11511.20E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control5.362
SRR1783600control5.581
SRR1783602moderate drought stress6.430
SRR1811619moderate drought stress6.594

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.929
DRR006520Root Summer glycyrrhizin high producing strain10.528
DRR006521Root Winter glycyrrhizin high producing strain9.141
DRR006522Root Winter glycyrrhizin high producing strain9.272
DRR006523Root Summer glycyrrhizin low producing strain6.704
DRR006524Root Summer glycyrrhizin low producing strain6.780
DRR006525Leaf Summer glycyrrhizin high producing strain9.723
DRR006526Leaf Summer glycyrrhizin high producing strain9.476

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.480
SRR2868004Drought Stress(Tissue:root)14.340
SRR2967015Control (Tissue:root)15.414

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.726
SRR9715740Leave25.733
SRR9715741Leave15.747
SRR9715739Root4.109
SRR9715742Root4.265
SRR9715743Root4.417

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.203
SRR8749028MeJA induced 9h21.510
SRR8749029MeJA induced 9h23.887
SRR8749030Uninduced18.583
SRR8749031Uninduced12.669
SRR8749032Uninduced12.652

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.688
SRR8400027Control-Root11.555

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved