Gene detail

Home
Network
Tools
- Search
- Blast
- Motif
- GSEA
- Heatmap Analysis
- JBrowse
Gene family
KEGG
Download
Help

Gene detail information of Glyur000180s00014056.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G62310.1	0	AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
NR	XP_006591955.1	0	PREDICTED: uncharacterized protein LOC100806311 isoform X1 [Glycine max]
COG	YP_008152560.1	6.00E-31	hypothetical protein SCE1572_30870 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q9LE81\|IRE_ARATH	0	Probable serine/threonine protein kinase IRE {ECO:0000305}
trEMBL	tr\|I1LNR5\|I1LNR5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G00670.1}

Sequence

Transcript Sequence

>Glyur000180s00014056.1
ATGTCGTCGACGTCTCNGCCGCCGCGTTCTTCAGACGCCGATCCCGCTCCTTCGACGTCGTCGCCGGTCTCCGCCAGAGCCAAGCTCCGGAAAATTCCGCCGATTATAAATCGACGGAATGCGGCACCGGCCANTGACGACGATGAAGACGAAGACGAATTAGCCGAAGAGATATTGGAGAAGCTGAAGCAGGAAAAAGAGGAAGGTCGTGAACACGAACGCGAACTTGAACTCGATCCTTCTCCTTCCATCTTGCTCGCGGCGTCTTCGTTAGGGCTCAATCACATTCGAACGCGTTCCACGTCTTCGCCTCTTCGCTATTCCTCCTCGGTTGGCGCAACAGCTTCTTCCTTCTTGGCAAATGATGCTCCTGCTGTCAGTATCAATGTCGCCAAACCTAGATCCAAAGCTTCCCTACCAAAGGAAATAGGGGAAAAACCTCATTGGAGTCAATCCAAATCGTTGAAAGCTCATTCACAACTCCTTCCTGTTCTAGAGGGTAATCATGCAGCTTTCGCCAAAGAGATGCAATCTCCACGTTTTCAGGAAATCCTGCGACTCACAAGTGGCCGCAAAAAGAGAAACCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGAGTTAGACCTTTTCCAATCTGGAAACATCGTGCCTGTGGGCATATGGAGGAAGTCATGGTAGCAATTAGAGCCAAGTTTGAAAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTGCTTTTGCTGGAGATTTGGTGGGTACTCTTGAAAAGATTTCAGGGTCTCATTGTGAAGGGAAAGAGGGGTTGGAGGATCTGTTGGTTGTTGCTCAACAATGTGCAAAGATGTCAGCTGCTGAGTTTTGGACCAAATGCGAAACTATTGTTCAAAATCTAGATGACAAGCGTCAAGAATTACCAATGGGGATCGTCAAGCAAGCTCATACCCGCCTNCTGTTTATTCTCACTCGGTGCACGCGCCTGGTGCAATTCCAGAAGGAAAGTGGCTATGAACAAGAACACATTCTGGGTCTTCACCAACTCAGCGATCTTGGAGTATATCCAGAGCAGATCTTGAAGGCTGCCCAGCAGAAACCCAGTATTCCACCTGCTGGTGGACATGAGATGGCTGAGAAGCAGTTGAAAAAGTCACATGGAAAAGAGAAAGACAAACTGATAAAGAAAAAGAGTCAAGCTGACCAACATAAAAGTGTTGGGATTGACAATGTGGAGGTATCTACAGCCAAAAGTGTTGAATCGACTCCTGGCAGCTATAGGATGTCTTCTTGGAGAAAGCTTCCATCTGCTGCTGAGAAAAAGCGCAAAGATCAAGATGCCGTTGATTTCCCATCCAAAGGTGAACTGGATCAGTTGCTAGTCAAAGATGAAAATGCTGAAAATTTGGATAATTTGTCATGTCATCCCGAACATTCACAGTCATCGTCCAGAACGCGAAAGGCTTCTTGGGGATTCTGGGGAGATCAGCAAAATCTATCATATGATGACTCAATGATCTGCAGGATTTGTGAGGTTGAAATACCAATAGTACATGTGGAGGAGCATTCTCGAATATGCACAATTGCCGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCCGAAACCATTGAAAGGATACTGGAATCCTGGACACCGAAAAGCACCCCAAAAAGCACNGATACTCATGGAGAAAGCTTCGAGGTTGTTAGAGTGTCAACATCAAGTGTGCATGAAGAGTTCAATGAGTTATCTCTTGAAAGAAATAACTTGTCTTGTAGATGCTCTGAAGACACGCTTGACTCAACTCCTGAACCTGACAATACTTTTGTCATGGATGATCTGAACCTTACACCCGAATTGTCATGTGAAGCTCGTATCTGCTTAAAACCTGATCATGGCACAAAGGTATCTTCAGCTGGAAGCTTGACACCGAGGTCACCCTTGATAACACCGCGTACNAGTCAGATAGAAATGTTACTAAGTGGACGAAGGACAATGTCTGAACTCGAGAGTTATGACCAGATAAACAAGCTAGTTGAAATAGCTCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTTTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATACGCAATTCAGGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGTCGACGAATAGAGAAGCTTTTGCAGGAGAAATATATAGTCCTTTGTGGGCAAATAGAAGATGAAAAGGTAGACTCATCACATAGCATGGCTGATGAAGAGAGTTCAGTTGAAGATGATACAGTCCGTAGCCTTCGNGCTAGCCCAATTAATACTTGTTCTAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGCAGGGGAGCATTTGGACGAGTTTTTCTTGCCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTCTGAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGTATTTTGGCAGAGCGAGACATCCTTATATCTGTTCGAAACCCTTTCGTGGTCCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTGGTTATGGAGTTTTTAAATGGTGGAGATCTTTATTCTCTGTTGAGAAATCTTGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCAGAAGTGGTACTTGCCTTGGAGTATTTGCATTCCTTAAATATAATTCACAGAGACTTGAAGCCAGATAACTTGTTGATTGGTCAAGATGGTCACATTAAGTTGACAGATTTTGGACTCTCAAAAGTTGGTCTNATCAACAGCACGGATGATTTATCAGCACCATTNTCTACCACCAATGGCTTTTTAGGAGATGATGAACCAAAACCCCGACATTCTTCAAAAAGGGAAGAACGTCAAAGAAAATCAGTAGTTGGCACCCCAGATTATTTGGCACCCGAAATACTTCTGGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCTTTTAATGCAGAATATCCACAGGAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCAAAGATTCCTGAGGAGATCAGCTATGAAGCATACGATTTGATAAATAGATTATTGAACGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCTACGGAAGTTAAACGCCATTCTTTCTTCAAGGATATCAGTTGGGATACTCTAGCAAGGCAAAAGGCTATGTTCATACCATCGGCTGAAGCTCTTGATACTAGTTATTTTATGAGCCGATACATTTGGAATCCAGAGGATGAACATTGTACTGGAGGAAGTGATTTTGATGACGTTACTGATACATGCAGCAGTGGTTCAGGCAGCGATTTATTAGATGAAGATGGTGATGAATGTGGTAGTTTAGCAGACTTCGGTGGTCCAGCTCTTGAGGTGCAGTACTCATTCAGTAACTTCTCATTTAAGAACTTGTCTCAGCTAGCATCTATCAATTATGATCTGGTGATTAAGAACTCCAAGGAATCACCCAATGATGCCAACCCATCTGTTTCATGA

Protein Sequence

>Glyur000180s00014056.1
MSSTSXPPRSSDADPAPSTSSPVSARAKLRKIPPIINRRNAAPAXDDDEDEDELAEEILEKLKQEKEEGREHERELELDPSPSILLAASSLGLNHIRTRSTSSPLRYSSSVGATASSFLANDAPAVSINVAKPRSKASLPKEIGEKPHWSQSKSLKAHSQLLPVLEGNHAAFAKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVRPFPIWKHRACGHMEEVMVAIRAKFEKLKEEVDSDLGAFAGDLVGTLEKISGSHCEGKEGLEDLLVVAQQCAKMSAAEFWTKCETIVQNLDDKRQELPMGIVKQAHTRLLFILTRCTRLVQFQKESGYEQEHILGLHQLSDLGVYPEQILKAAQQKPSIPPAGGHEMAEKQLKKSHGKEKDKLIKKKSQADQHKSVGIDNVEVSTAKSVESTPGSYRMSSWRKLPSAAEKKRKDQDAVDFPSKGELDQLLVKDENAENLDNLSCHPEHSQSSSRTRKASWGFWGDQQNLSYDDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIERILESWTPKSTPKSTDTHGESFEVVRVSTSSVHEEFNELSLERNNLSCRCSEDTLDSTPEPDNTFVMDDLNLTPELSCEARICLKPDHGTKVSSAGSLTPRSPLITPRTSQIEMLLSGRRTMSELESYDQINKLVEIARAVANVNNCDYSALEYMLDRLEDLKYAIQDRKVDALIVETFGRRIEKLLQEKYIVLCGQIEDEKVDSSHSMADEESSVEDDTVRSLRASPINTCSKDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLNIIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPXSTTNGFLGDDEPKPRHSSKREERQRKSVVGTPDYLAPEILLGMGHGATADWWSVGVILYELLVGIPPFNAEYPQEIFDNIINRDIQWPKIPEEISYEAYDLINRLLNENPVQRLGATGATEVKRHSFFKDISWDTLARQKAMFIPSAEALDTSYFMSRYIWNPEDEHCTGGSDFDDVTDTCSSGSGSDLLDEDGDECGSLADFGGPALEVQYSFSNFSFKNLSQLASINYDLVIKNSKESPNDANPSVS

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00180	74190	90296	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.2.6

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000180s00014056.1	PF00069.20	Pkinase	793	1081	6.00E-65

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.378
SRR1783600	control	0.362
SRR1783602	moderate drought stress	0.229
SRR1811619	moderate drought stress	0.237

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.119
DRR006520	Root Summer glycyrrhizin high producing strain	0.117
DRR006521	Root Winter glycyrrhizin high producing strain	0.018
DRR006522	Root Winter glycyrrhizin high producing strain	0.026
DRR006523	Root Summer glycyrrhizin low producing strain	0.030
DRR006524	Root Summer glycyrrhizin low producing strain	0.030
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.689
SRR2868004	Drought Stress(Tissue:root)	0.882
SRR2967015	Control (Tissue:root)	0.474

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.483
SRR9715740	Leave	0.089
SRR9715741	Leave	0.224
SRR9715739	Root	0.007
SRR9715742	Root	0.124
SRR9715743	Root	0.103

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.876
SRR8749028	MeJA induced 9h	2.131
SRR8749029	MeJA induced 9h	1.170
SRR8749030	Uninduced	0.565
SRR8749031	Uninduced	0.360
SRR8749032	Uninduced	0.091

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.753
SRR8400027	Control-Root	1.215