Gene detail information of Glyur000180s00014076.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G40860.10protein kinase family protein / protein phosphatase 2C ( PP2C) family protein
NRXP_004497719.10PREDICTED: protein kinase and PP2C-like domain-containing protein-like [Cicer arietinum]
COGYP_003709340.15.00E-19serine/threonine PP2C protein phosphatase [Waddlia chondrophila WSU 86-1044]
Swissprottr|Q940A2|P2C31_ARATH0Probable protein phosphatase 2C 31
trEMBLtr|V7BKC4|V7BKC4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17500.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00180189842196577-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000180s00014076.1PF00069.20Pkinase323558.50E-33
Glyur000180s00014076.1PF00481.16PP2C4386853.50E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.473
SRR1783600control7.480
SRR1783602moderate drought stress7.963
SRR1811619moderate drought stress7.806

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.179
DRR006520Root Summer glycyrrhizin high producing strain11.028
DRR006521Root Winter glycyrrhizin high producing strain14.428
DRR006522Root Winter glycyrrhizin high producing strain14.138
DRR006523Root Summer glycyrrhizin low producing strain11.352
DRR006524Root Summer glycyrrhizin low producing strain11.251
DRR006525Leaf Summer glycyrrhizin high producing strain9.009
DRR006526Leaf Summer glycyrrhizin high producing strain8.697

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.791
SRR2868004Drought Stress(Tissue:root)12.395
SRR2967015Control (Tissue:root)11.700

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.544
SRR9715740Leave16.956
SRR9715741Leave16.048
SRR9715739Root5.032
SRR9715742Root10.714
SRR9715743Root9.457

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.054
SRR8749028MeJA induced 9h6.968
SRR8749029MeJA induced 9h2.455
SRR8749030Uninduced7.003
SRR8749031Uninduced2.066
SRR8749032Uninduced2.526

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.380
SRR8400027Control-Root10.568

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved