Gene detail information of Glyur000180s00014082.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G32700.50LEUNIG_homolog
NRXP_007145511.10hypothetical protein PHAVU_007G244700g [Phaseolus vulgaris]
COGYP_001865069.13.00E-34hypothetical protein Npun_F1419 [Nostoc punctiforme PCC 73102]
Swissprottr|Q9FUY2|LEUNG_ARATH2.00E-166Transcriptional corepressor LEUNIG
trEMBLtr|V7BKD0|V7BKD0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17505.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00180240372252760+


Gene family

Gene familysubfamily
Transcription Factors FamilyLUG
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000180s00014082.2PF08513.6LisH10351.40E-07
Glyur000180s00014082.2PF00400.27WD405095371.40E-05
Glyur000180s00014082.2PF00400.27WD405475796.10E-07
Glyur000180s00014082.2PF00400.27WD405876230.00022
Glyur000180s00014082.2PF00400.27WD406697025.90E-06
Glyur000180s00014082.2PF00400.27WD407537861.30E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.023
SRR1783600control16.047
SRR1783602moderate drought stress13.337
SRR1811619moderate drought stress13.181

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.797
DRR006520Root Summer glycyrrhizin high producing strain12.818
DRR006521Root Winter glycyrrhizin high producing strain8.267
DRR006522Root Winter glycyrrhizin high producing strain8.039
DRR006523Root Summer glycyrrhizin low producing strain16.205
DRR006524Root Summer glycyrrhizin low producing strain16.827
DRR006525Leaf Summer glycyrrhizin high producing strain10.387
DRR006526Leaf Summer glycyrrhizin high producing strain10.589

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.477
SRR2868004Drought Stress(Tissue:root)25.874
SRR2967015Control (Tissue:root)27.123

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.986
SRR9715740Leave13.763
SRR9715741Leave17.010
SRR9715739Root7.463
SRR9715742Root20.040
SRR9715743Root18.392

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.372
SRR8749028MeJA induced 9h29.029
SRR8749029MeJA induced 9h13.280
SRR8749030Uninduced8.325
SRR8749031Uninduced5.187
SRR8749032Uninduced4.417

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.176
SRR8400027Control-Root25.184

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved