Gene detail information of Glyur000181s00013087.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08250.12.00E-171arogenate dehydratase 6
NRXP_003540785.10PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Glycine max]
COGYP_004172970.15.00E-81prephenate dehydratase [Anaerolinea thermophila UNI-1]
Swissprottr|Q9SGD6|AROD6_ARATH0Arogenate dehydratase/prephenate dehydratase 6, chloroplastic (Precursor)
trEMBLtr|I1LRC6|I1LRC6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G09050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00181130477131760-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05359ADT, PDT EC:4.2.1.91 4.2.1.51 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0009094  L-phenylalanine biosynthetic process


molecular_function

GO:0004664  prephenate dehydratase activity

GO:0016597  amino acid binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000181s00013087.1PF00800.13PDT1283063.90E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.676
SRR1783600control19.476
SRR1783602moderate drought stress23.825
SRR1811619moderate drought stress27.716

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.857
DRR006520Root Summer glycyrrhizin high producing strain21.193
DRR006521Root Winter glycyrrhizin high producing strain4.562
DRR006522Root Winter glycyrrhizin high producing strain4.703
DRR006523Root Summer glycyrrhizin low producing strain32.278
DRR006524Root Summer glycyrrhizin low producing strain34.708
DRR006525Leaf Summer glycyrrhizin high producing strain16.205
DRR006526Leaf Summer glycyrrhizin high producing strain16.065

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.535
SRR2868004Drought Stress(Tissue:root)55.594
SRR2967015Control (Tissue:root)36.687

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave66.989
SRR9715740Leave41.212
SRR9715741Leave73.408
SRR9715739Root78.636
SRR9715742Root109.996
SRR9715743Root104.904

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.461
SRR8749028MeJA induced 9h11.491
SRR8749029MeJA induced 9h10.510
SRR8749030Uninduced41.690
SRR8749031Uninduced16.397
SRR8749032Uninduced18.396

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.263
SRR8400027Control-Root27.683