Gene detail information of Glyur000181s00013091.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G22620.22.00E-173phosphoglycerate/bisphosphoglycerate mutase family protein
NRXP_007132387.10hypothetical protein PHAVU_011G090600g [Phaseolus vulgaris]
COGYP_007094591.11.00E-59phosphoglycerate mutase [Chroococcidiopsis thermalis PCC 7203]
Swissprottr|Q9FNJ9|CA1P_ARATH0Probable 2-carboxy-D-arabinitol-1-phosphatase {ECO:0000305} (Precursor)
trEMBLtr|G4VUY8|G4VUY8_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04381.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00181159963164700+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15634gpmB EC:5.4.2.12 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Methane metabolismmap00680
Glycine, serine and threonine metabolismmap00260


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0003824  catalytic activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000181s00013091.1PF00300.17His_Phos_1722251.30E-33
Glyur000181s00013091.1PF00300.17His_Phos_12903867.60E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.174
SRR1783600control4.223
SRR1783602moderate drought stress8.428
SRR1811619moderate drought stress8.419

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.678
DRR006520Root Summer glycyrrhizin high producing strain3.639
DRR006521Root Winter glycyrrhizin high producing strain7.653
DRR006522Root Winter glycyrrhizin high producing strain7.079
DRR006523Root Summer glycyrrhizin low producing strain3.902
DRR006524Root Summer glycyrrhizin low producing strain4.178
DRR006525Leaf Summer glycyrrhizin high producing strain104.385
DRR006526Leaf Summer glycyrrhizin high producing strain103.742

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)5.690
SRR2868004Drought Stress(Tissue:root)6.562
SRR2967015Control (Tissue:root)6.128

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave39.056
SRR9715740Leave69.812
SRR9715741Leave28.037
SRR9715739Root1.261
SRR9715742Root2.683
SRR9715743Root2.676

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.391
SRR8749028MeJA induced 9h3.384
SRR8749029MeJA induced 9h4.506
SRR8749030Uninduced4.657
SRR8749031Uninduced3.574
SRR8749032Uninduced4.314

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root9.036
SRR8400027Control-Root6.498

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved