Gene detail information of Glyur000182s00014518.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G54380.10protein kinase family protein
NRXP_007149628.10hypothetical protein PHAVU_005G085600g [Phaseolus vulgaris]
COGYP_008151634.12.00E-24hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9LK35|THE1_ARATH0Receptor-like protein kinase THESEUS 1 (Precursor)
trEMBLtr|V7BX48|V7BX48_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW21623.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001825459757155-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000182s00014518.1PF12819.2Malectin_like352424.10E-26
Glyur000182s00014518.1PF07714.12Pkinase_Tyr4146763.20E-48


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control27.786
SRR1783600control27.734
SRR1783602moderate drought stress9.814
SRR1811619moderate drought stress9.870

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain19.261
DRR006520Root Summer glycyrrhizin high producing strain19.940
DRR006521Root Winter glycyrrhizin high producing strain0.634
DRR006522Root Winter glycyrrhizin high producing strain0.663
DRR006523Root Summer glycyrrhizin low producing strain38.944
DRR006524Root Summer glycyrrhizin low producing strain39.215
DRR006525Leaf Summer glycyrrhizin high producing strain7.289
DRR006526Leaf Summer glycyrrhizin high producing strain7.173

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.864
SRR2868004Drought Stress(Tissue:root)17.994
SRR2967015Control (Tissue:root)19.990

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.731
SRR9715740Leave16.163
SRR9715741Leave12.674
SRR9715739Root31.143
SRR9715742Root30.528
SRR9715743Root32.759

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.543
SRR8749028MeJA induced 9h22.889
SRR8749029MeJA induced 9h8.178
SRR8749030Uninduced22.422
SRR8749031Uninduced1.514
SRR8749032Uninduced5.539

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.248
SRR8400027Control-Root25.395

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved