Gene detail information of Glyur000183s00013040.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58130.2 | 2.00E-73 | N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein |
| NR | AFK44429.1 | 1.23E-146 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SVY7|I3SVY7_LOTJA | 5.00E-147 | Uncharacterized protein {ECO:0000313|EMBL:AFK44429.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00183 | 143065 | 147545 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K03434 | PIGL | EC:3.5.1.89 | Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | map00563 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000183s00013040.1 | PF02585.12 | PIG-L | 95 | 180 | 3.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.195 |
| SRR1783600 | control | 8.122 |
| SRR1783602 | moderate drought stress | 6.920 |
| SRR1811619 | moderate drought stress | 6.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.823 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.123 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.212 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.098 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.297 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.573 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.118 |
| SRR2868004 | Drought Stress(Tissue:root) | 13.036 |
| SRR2967015 | Control (Tissue:root) | 12.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.303 |
| SRR9715740 | Leave | 14.098 |
| SRR9715741 | Leave | 11.836 |
| SRR9715739 | Root | 2.994 |
| SRR9715742 | Root | 5.105 |
| SRR9715743 | Root | 5.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.914 |
| SRR8749028 | MeJA induced 9h | 8.965 |
| SRR8749029 | MeJA induced 9h | 10.080 |
| SRR8749030 | Uninduced | 9.441 |
| SRR8749031 | Uninduced | 5.235 |
| SRR8749032 | Uninduced | 4.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 13.148 |
| SRR8400027 | Control-Root | 13.010 |