Gene detail information of Glyur000183s00013050.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G30760.10FAD-binding Berberine family protein
NRXP_003524780.10PREDICTED: tetrahydrocannabinolic acid synthase-like [Glycine max]
COGYP_008155704.12.00E-36hypothetical protein SCE1572_46785 [Sorangium cellulosum So0157-2]
Swissprottr|Q8GTB6|THCAS_CANSA4.00E-163Tetrahydrocannabinolic acid synthase (Precursor)
trEMBLtr|I1K2X6|I1K2X6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G25580.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00183174950176560-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyAA7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0008762  UDP-N-acetylmuramate dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000183s00013050.1PF01565.18FAD_binding_4822212.70E-27
Glyur000183s00013050.1PF08031.7BBE4755322.20E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control52.288
SRR1783600control52.421
SRR1783602moderate drought stress100.361
SRR1811619moderate drought stress100.758

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain59.199
DRR006520Root Summer glycyrrhizin high producing strain57.604
DRR006521Root Winter glycyrrhizin high producing strain1.481
DRR006522Root Winter glycyrrhizin high producing strain1.722
DRR006523Root Summer glycyrrhizin low producing strain18.653
DRR006524Root Summer glycyrrhizin low producing strain18.439
DRR006525Leaf Summer glycyrrhizin high producing strain17.382
DRR006526Leaf Summer glycyrrhizin high producing strain17.315

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.789
SRR2868004Drought Stress(Tissue:root)63.555
SRR2967015Control (Tissue:root)33.054

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave25.503
SRR9715740Leave12.974
SRR9715741Leave11.206
SRR9715739Root63.093
SRR9715742Root191.647
SRR9715743Root162.781

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.743
SRR8749028MeJA induced 9h3.704
SRR8749029MeJA induced 9h2.092
SRR8749030Uninduced2.838
SRR8749031Uninduced0.895
SRR8749032Uninduced1.255

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root102.418
SRR8400027Control-Root107.059

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved