Gene detail information of Glyur000183s00013066.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G20790.16.00E-148Leucine-rich repeat protein kinase family protein
NRXP_003524097.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20450-like [Glycine max]
Swissprottr|C0LGP4|Y3475_ARATH7.00E-26Probable LRR receptor-like serine/threonine-protein kinase At3g47570 (Precursor)
trEMBLtr|I1K2W3|I1K2W3_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G25390.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00183251934253654+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.Other


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000183s00013066.1PF00560.28LRR_11711920.81
Glyur000183s00013066.1PF07714.12Pkinase_Tyr2744083.10E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.023
SRR1783600control0.023
SRR1783602moderate drought stress0.048
SRR1811619moderate drought stress0.048

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.320
DRR006520Root Summer glycyrrhizin high producing strain0.337
DRR006521Root Winter glycyrrhizin high producing strain0.069
DRR006522Root Winter glycyrrhizin high producing strain0.068
DRR006523Root Summer glycyrrhizin low producing strain0.486
DRR006524Root Summer glycyrrhizin low producing strain0.486
DRR006525Leaf Summer glycyrrhizin high producing strain0.291
DRR006526Leaf Summer glycyrrhizin high producing strain0.291

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.285
SRR2868004Drought Stress(Tissue:root)0.248
SRR2967015Control (Tissue:root)0.285

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.189
SRR9715740Leave0.499
SRR9715741Leave0.308
SRR9715739Root0.187
SRR9715742Root0.116
SRR9715743Root0.000

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.171
SRR8749028MeJA induced 9h0.245
SRR8749029MeJA induced 9h0.457
SRR8749030Uninduced0.368
SRR8749031Uninduced0.765
SRR8749032Uninduced1.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.307
SRR8400027Control-Root0.259

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved