Gene detail information of Glyur000184s00008177.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G00570.10NAD-dependent malic enzyme 2
NRXP_003521187.10PREDICTED: NAD-dependent malic enzyme 2, mitochondrial-like [Glycine max]
COGYP_005607828.14.00E-159malic enzyme [Bradyrhizobium japonicum USDA 6]
Swissprottr|P37225|MAON_SOLTU0NAD-dependent malic enzyme 59 kDa isoform, mitochondrial (Precursor)
trEMBLtr|I1JKC3|I1JKC3_SOYBN0Malic enzyme {ECO:0000256|RuleBase:RU003426}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001847083078537+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00028E1.1.1.39 EC:1.1.1.39 Carbon metabolism map01200
Pyruvate metabolismmap00620
Carbon fixation in photosynthetic organismsmap00710


Gene Ontology

biological_process

GO:0006108  malate metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004470  malic enzyme activity

GO:0004471  malate dehydrogenase (decarboxylating) (NAD+) activity

GO:0051287  NAD binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000184s00008177.1PF00390.14malic1022811.30E-75
Glyur000184s00008177.1PF03949.10Malic_M2925551.00E-81


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.858
SRR1783600control44.724
SRR1783602moderate drought stress40.463
SRR1811619moderate drought stress39.865

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain50.659
DRR006520Root Summer glycyrrhizin high producing strain49.628
DRR006521Root Winter glycyrrhizin high producing strain28.816
DRR006522Root Winter glycyrrhizin high producing strain28.263
DRR006523Root Summer glycyrrhizin low producing strain32.033
DRR006524Root Summer glycyrrhizin low producing strain32.023
DRR006525Leaf Summer glycyrrhizin high producing strain46.381
DRR006526Leaf Summer glycyrrhizin high producing strain46.061

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.027
SRR2868004Drought Stress(Tissue:root)40.127
SRR2967015Control (Tissue:root)45.752

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave62.277
SRR9715740Leave75.137
SRR9715741Leave66.066
SRR9715739Root34.123
SRR9715742Root52.650
SRR9715743Root55.215

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.737
SRR8749028MeJA induced 9h15.316
SRR8749029MeJA induced 9h9.098
SRR8749030Uninduced3.939
SRR8749031Uninduced2.023
SRR8749032Uninduced2.596

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.654
SRR8400027Control-Root64.524

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved