Gene detail information of Glyur000184s00008183.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G45790.11.00E-118phosphomannomutase
NRXP_006375330.11.70E-164phosphomannomutase family protein [Populus trichocarpa]
COGNP_266726.17.00E-08hypothetical protein L165449 [Lactococcus lactis subsp. lactis Il1403]
Swissprottr|Q1W376|PMM_SOYBN2.00E-159Phosphomannomutase
trEMBLtr|A9PI53|A9PI53_POPTR6.00E-165Phosphomannomutase {ECO:0000256|RuleBase:RU361118}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00184111320114838+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K17497PMM EC:5.4.2.8 Fructose and mannose metabolism map00051
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0019307  mannose biosynthetic process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0003824  catalytic activity

GO:0004615  phosphomannomutase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000184s00008183.1PF03332.8PMM292441.60E-107


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.162
SRR1783600control9.497
SRR1783602moderate drought stress14.943
SRR1811619moderate drought stress14.944

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.620
DRR006520Root Summer glycyrrhizin high producing strain11.188
DRR006521Root Winter glycyrrhizin high producing strain24.947
DRR006522Root Winter glycyrrhizin high producing strain23.835
DRR006523Root Summer glycyrrhizin low producing strain13.809
DRR006524Root Summer glycyrrhizin low producing strain14.131
DRR006525Leaf Summer glycyrrhizin high producing strain12.748
DRR006526Leaf Summer glycyrrhizin high producing strain12.219

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)34.461
SRR2868004Drought Stress(Tissue:root)29.194
SRR2967015Control (Tissue:root)33.333

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.313
SRR9715740Leave24.827
SRR9715741Leave25.103
SRR9715739Root3.406
SRR9715742Root6.138
SRR9715743Root5.736

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h80.234
SRR8749028MeJA induced 9h95.885
SRR8749029MeJA induced 9h81.646
SRR8749030Uninduced32.669
SRR8749031Uninduced25.018
SRR8749032Uninduced25.052

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.833
SRR8400027Control-Root25.443

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved