Gene detail information of Glyur000184s00008198.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61250.1 | 2.00E-44 | myb domain protein 17 |
| NR | XP_004510807.1 | 2.19E-58 | PREDICTED: protein ODORANT1-like [Cicer arietinum] |
| Swissprot | tr|Q7XBH4|MYB4_ORYSJ | 3.00E-44 | Myb-related protein Myb4 |
| trEMBL | tr|G7L3J2|G7L3J2_MEDTR | 1.00E-57 | Myb transcription factor MIXTA-like protein {ECO:0000313|EMBL:AES80112.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00184 | 175188 | 176794 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000184s00008198.1 | PF00249.26 | Myb_DNA-binding | 14 | 62 | 1.40E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.411 |
| SRR1783600 | control | 0.286 |
| SRR1783602 | moderate drought stress | 1.237 |
| SRR1811619 | moderate drought stress | 1.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.781 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.661 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.761 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.556 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.902 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.974 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.300 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.563 |
| SRR2967015 | Control (Tissue:root) | 0.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.205 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.449 |
| SRR9715742 | Root | 0.218 |
| SRR9715743 | Root | 0.374 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.100 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.152 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.232 |
| SRR8400027 | Control-Root | 0.643 |