Gene detail information of Glyur000185s00016447.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G70250.13.00E-26receptor serine/threonine kinase, putative
NRAES80585.22.81E-58receptor-like kinase [Medicago truncatula]
COGYP_001958461.12.00E-20hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FID6|Y5392_ARATH4.00E-26Probable receptor-like protein kinase At5g39020 (Precursor)
trEMBLtr|G7KUD5|G7KUD5_MEDTR1.00E-58Receptor-like kinase {ECO:0000313|EMBL:AES80585.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001854196946259-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000185s00016447.2PF08263.7LRRNT_236680.00093
Glyur000185s00016447.2PF13855.1LRR_81021593.40E-13
Glyur000185s00016447.2PF13516.1LRR_62002210.79
Glyur000185s00016447.2PF13855.1LRR_83744181.90E-08
Glyur000185s00016447.2PF00069.20Pkinase5487201.00E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.983
SRR1783600control4.061
SRR1783602moderate drought stress0.799
SRR1811619moderate drought stress0.705

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.132
DRR006520Root Summer glycyrrhizin high producing strain1.901
DRR006521Root Winter glycyrrhizin high producing strain1.294
DRR006522Root Winter glycyrrhizin high producing strain1.326
DRR006523Root Summer glycyrrhizin low producing strain0.628
DRR006524Root Summer glycyrrhizin low producing strain0.575
DRR006525Leaf Summer glycyrrhizin high producing strain1.565
DRR006526Leaf Summer glycyrrhizin high producing strain1.420

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.072
SRR2868004Drought Stress(Tissue:root)0.112
SRR2967015Control (Tissue:root)0.066

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.971
SRR9715740Leave1.993
SRR9715741Leave2.411
SRR9715739Root1.068
SRR9715742Root3.010
SRR9715743Root1.796

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.126
SRR8749028MeJA induced 9h0.049
SRR8749029MeJA induced 9h0.119
SRR8749030Uninduced0.099
SRR8749031Uninduced0.051
SRR8749032Uninduced0.122

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.766
SRR8400027Control-Root3.850

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved