Gene detail information of Glyur000185s00016451.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66980.14.00E-93suppressor of npr1-1 constitutive 4
NRKEH29536.11.29E-172receptor-like kinase, putative [Medicago truncatula]
COGYP_001958461.16.00E-25hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|D7SFH9|GPDL2_ARATH7.00E-106Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 {ECO:0000305} (Precursor)
trEMBLtr|A0A072UJD1|A0A072UJD1_MEDTR5.00E-173Receptor-like kinase, putative {ECO:0000313|EMBL:KEH29536.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001856039763077-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000185s00016451.1PF00069.20Pkinase1433465.70E-46


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.497
SRR1783600control1.316
SRR1783602moderate drought stress0.128
SRR1811619moderate drought stress0.218

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.405
DRR006520Root Summer glycyrrhizin high producing strain0.874
DRR006521Root Winter glycyrrhizin high producing strain0.033
DRR006522Root Winter glycyrrhizin high producing strain0.104
DRR006523Root Summer glycyrrhizin low producing strain2.236
DRR006524Root Summer glycyrrhizin low producing strain1.599
DRR006525Leaf Summer glycyrrhizin high producing strain0.375
DRR006526Leaf Summer glycyrrhizin high producing strain0.263

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.488
SRR2868004Drought Stress(Tissue:root)8.563
SRR2967015Control (Tissue:root)4.955

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.043
SRR9715740Leave0.594
SRR9715741Leave11.938
SRR9715739Root0.468
SRR9715742Root1.881
SRR9715743Root1.997

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.192
SRR8749028MeJA induced 9h17.786
SRR8749029MeJA induced 9h30.835
SRR8749030Uninduced18.367
SRR8749031Uninduced10.526
SRR8749032Uninduced12.049

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root2.733
SRR8400027Control-Root11.745

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved