Gene detail information of Glyur000185s00016463.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G66880.1 | 1.00E-123 | Protein kinase superfamily protein |
NR | XP_006603050.1 | 0 | PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X1 [Glycine max] |
COG | YP_002763346.1 | 9.00E-24 | putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27] |
Swissprot | tr|P0C5E2|Y1839_ARATH | 2.00E-150 | Probable serine/threonine-protein kinase At1g18390 (Precursor) |
trEMBL | tr|K7MVH1|K7MVH1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53220.2} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00185 | 152325 | 165352 | - |
Gene family
Gene family | subfamily |
---|---|
Protein Kinases Family | PPC:1.5.2 |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
-- | -- | -- | -- | -- |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000185s00016463.1 | PF13947.1 | GUB_WAK_bind | 37 | 137 | 1.30E-07 |
Glyur000185s00016463.1 | PF14380.1 | WAK_assoc | 173 | 242 | 1.50E-14 |
Glyur000185s00016463.1 | PF00069.20 | Pkinase | 365 | 624 | 1.50E-45 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 3.053 |
SRR1783600 | control | 3.026 |
SRR1783602 | moderate drought stress | 3.239 |
SRR1811619 | moderate drought stress | 3.261 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.420 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.381 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.406 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.396 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 0.766 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 0.661 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.638 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.567 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 20.114 |
SRR2868004 | Drought Stress(Tissue:root) | 41.230 |
SRR2967015 | Control (Tissue:root) | 25.121 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 14.293 |
SRR9715740 | Leave | 8.675 |
SRR9715741 | Leave | 32.377 |
SRR9715739 | Root | 4.106 |
SRR9715742 | Root | 6.523 |
SRR9715743 | Root | 7.661 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 20.349 |
SRR8749028 | MeJA induced 9h | 57.182 |
SRR8749029 | MeJA induced 9h | 59.399 |
SRR8749030 | Uninduced | 101.505 |
SRR8749031 | Uninduced | 207.191 |
SRR8749032 | Uninduced | 127.370 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 18.589 |
SRR8400027 | Control-Root | 17.010 |