Gene detail information of Glyur000185s00016463.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G66880.11.00E-123Protein kinase superfamily protein
NRXP_006603050.10PREDICTED: probable serine/threonine-protein kinase At1g18390-like isoform X1 [Glycine max]
COGYP_002763346.19.00E-24putative serine/threonine protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|P0C5E2|Y1839_ARATH2.00E-150Probable serine/threonine-protein kinase At1g18390 (Precursor)
trEMBLtr|K7MVH1|K7MVH1_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G53220.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00185152325165352-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030247  polysaccharide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000185s00016463.1PF13947.1GUB_WAK_bind371371.30E-07
Glyur000185s00016463.1PF14380.1WAK_assoc1732421.50E-14
Glyur000185s00016463.1PF00069.20Pkinase3656241.50E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.053
SRR1783600control3.026
SRR1783602moderate drought stress3.239
SRR1811619moderate drought stress3.261

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.420
DRR006520Root Summer glycyrrhizin high producing strain0.381
DRR006521Root Winter glycyrrhizin high producing strain0.406
DRR006522Root Winter glycyrrhizin high producing strain0.396
DRR006523Root Summer glycyrrhizin low producing strain0.766
DRR006524Root Summer glycyrrhizin low producing strain0.661
DRR006525Leaf Summer glycyrrhizin high producing strain1.638
DRR006526Leaf Summer glycyrrhizin high producing strain1.567

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.114
SRR2868004Drought Stress(Tissue:root)41.230
SRR2967015Control (Tissue:root)25.121

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.293
SRR9715740Leave8.675
SRR9715741Leave32.377
SRR9715739Root4.106
SRR9715742Root6.523
SRR9715743Root7.661

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.349
SRR8749028MeJA induced 9h57.182
SRR8749029MeJA induced 9h59.399
SRR8749030Uninduced101.505
SRR8749031Uninduced207.191
SRR8749032Uninduced127.370

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.589
SRR8400027Control-Root17.010