Gene detail information of Glyur000186s00009855.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G08620.25.00E-147Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
NRXP_004493785.10PREDICTED: probable lysine-specific demethylase JMJ14-like isoform X1 [Cicer arietinum]
Swissprottr|Q53WJ1|JM703_ORYSJ0Lysine-specific demethylase JMJ703
trEMBLtr|K7MYQ0|K7MYQ0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G34870.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001864751053070-


Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000186s00009855.1PF02375.12JmjN1011341.30E-14
Glyur000186s00009855.1PF02373.17JmjC3504631.60E-30
Glyur000186s00009855.1PF02928.11zf-C5HC25716238.60E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.022
SRR1783600control7.036
SRR1783602moderate drought stress9.943
SRR1811619moderate drought stress9.724

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.833
DRR006520Root Summer glycyrrhizin high producing strain12.964
DRR006521Root Winter glycyrrhizin high producing strain9.716
DRR006522Root Winter glycyrrhizin high producing strain9.425
DRR006523Root Summer glycyrrhizin low producing strain8.340
DRR006524Root Summer glycyrrhizin low producing strain8.179
DRR006525Leaf Summer glycyrrhizin high producing strain8.237
DRR006526Leaf Summer glycyrrhizin high producing strain8.319

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.876
SRR2868004Drought Stress(Tissue:root)15.906
SRR2967015Control (Tissue:root)17.215

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.194
SRR9715740Leave11.343
SRR9715741Leave12.659
SRR9715739Root1.122
SRR9715742Root7.216
SRR9715743Root4.666

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.328
SRR8749028MeJA induced 9h15.919
SRR8749029MeJA induced 9h9.928
SRR8749030Uninduced14.955
SRR8749031Uninduced10.237
SRR8749032Uninduced9.111

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.716
SRR8400027Control-Root20.738

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved