Gene detail information of Glyur000186s00009857.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28530.1 | 2.00E-74 | NAC domain containing protein 74 |
| NR | XP_006604496.1 | 1.54E-167 | PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Glycine max] |
| Swissprot | tr|Q84TE6|NAC22_ARATH | 3.00E-63 | NAC domain-containing protein 21/22 |
| trEMBL | tr|K7MYQ1|K7MYQ1_SOYBN | 6.00E-168 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G34881.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00186 | 59417 | 64558 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000186s00009857.1 | PF02365.10 | NAM | 10 | 138 | 5.90E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.393 |
| SRR1783600 | control | 5.606 |
| SRR1783602 | moderate drought stress | 3.995 |
| SRR1811619 | moderate drought stress | 3.978 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.411 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 33.102 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.212 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 56.081 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.329 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.356 |
| SRR2868004 | Drought Stress(Tissue:root) | 4.716 |
| SRR2967015 | Control (Tissue:root) | 5.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.083 |
| SRR9715740 | Leave | 0.642 |
| SRR9715741 | Leave | 0.856 |
| SRR9715739 | Root | 0.796 |
| SRR9715742 | Root | 9.640 |
| SRR9715743 | Root | 7.228 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.043 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.061 |
| SRR8749031 | Uninduced | 0.049 |
| SRR8749032 | Uninduced | 0.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.097 |
| SRR8400027 | Control-Root | 11.074 |