Gene detail information of Glyur000186s00009862.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G03920.10Protein kinase family protein
NRXP_004493792.10PREDICTED: serine/threonine-protein kinase 38-like isoform X1 [Cicer arietinum]
COGYP_643722.11.00E-24serine/threonine protein kinase [Rubrobacter xylanophilus DSM 9941]
Swissprottr|F4J6F6|IREH1_ARATH6.00E-82Probable serine/threonine protein kinase IREH1 {ECO:0000305}
trEMBLtr|A0A072U4A3|A0A072U4A3_MEDTR0AGC kinase {ECO:0000313|EMBL:KEH23943.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0018697216103674+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000186s00009862.1PF00069.20Pkinase1404386.90E-64
Glyur000186s00009862.1PF00433.19Pkinase_C4575043.00E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.694
SRR1783600control0.761
SRR1783602moderate drought stress0.648
SRR1811619moderate drought stress0.662

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.939
DRR006520Root Summer glycyrrhizin high producing strain1.832
DRR006521Root Winter glycyrrhizin high producing strain0.903
DRR006522Root Winter glycyrrhizin high producing strain1.057
DRR006523Root Summer glycyrrhizin low producing strain0.425
DRR006524Root Summer glycyrrhizin low producing strain0.504
DRR006525Leaf Summer glycyrrhizin high producing strain1.871
DRR006526Leaf Summer glycyrrhizin high producing strain1.757

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.868
SRR2868004Drought Stress(Tissue:root)0.403
SRR2967015Control (Tissue:root)0.673

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.307
SRR9715740Leave1.960
SRR9715741Leave1.101
SRR9715739Root0.356
SRR9715742Root0.785
SRR9715743Root0.617

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.934
SRR8749028MeJA induced 9h0.238
SRR8749029MeJA induced 9h0.378
SRR8749030Uninduced0.025
SRR8749031Uninduced0.084
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.745
SRR8400027Control-Root4.171

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved