Gene detail information of Glyur000186s00009863.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G23340.11.00E-170casein kinase I-like 10
NRKHN10755.10Casein kinase I isoform delta-like [Glycine soja]
COGYP_632759.11.00E-17serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|A0A072U2M8|A0A072U2M8_MEDTR0Casein kinase I-like protein {ECO:0000313|EMBL:KEH23944.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00186109726114708+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000186s00009863.2PF00069.20Pkinase92503.90E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.168
SRR1783600control19.155
SRR1783602moderate drought stress14.464
SRR1811619moderate drought stress13.725

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.427
DRR006520Root Summer glycyrrhizin high producing strain25.268
DRR006521Root Winter glycyrrhizin high producing strain46.389
DRR006522Root Winter glycyrrhizin high producing strain45.931
DRR006523Root Summer glycyrrhizin low producing strain18.610
DRR006524Root Summer glycyrrhizin low producing strain18.482
DRR006525Leaf Summer glycyrrhizin high producing strain17.469
DRR006526Leaf Summer glycyrrhizin high producing strain17.137

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.013
SRR2868004Drought Stress(Tissue:root)40.139
SRR2967015Control (Tissue:root)39.994

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.783
SRR9715740Leave15.488
SRR9715741Leave17.185
SRR9715739Root7.807
SRR9715742Root24.790
SRR9715743Root23.163

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.863
SRR8749028MeJA induced 9h32.415
SRR8749029MeJA induced 9h17.498
SRR8749030Uninduced18.663
SRR8749031Uninduced24.277
SRR8749032Uninduced20.252

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.507
SRR8400027Control-Root34.404

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved