Gene detail information of Glyur000189s00009588.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G18610.21.00E-105Protein kinase superfamily protein
NRNP_001055359.10Os05g0372100 [Oryza sativa Japonica Group]
COGYP_001958461.11.00E-19hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FE20|PBS1_ARATH7.00E-121Serine/threonine-protein kinase PBS1
trEMBLtr|Q0DIQ0|Q0DIQ0_ORYSJ0Os05g0372100 protein {ECO:0000313|EMBL:BAF17273.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001892381828828+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000189s00009588.1PF00069.20Pkinase962428.10E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control31.973
SRR1783600control32.155
SRR1783602moderate drought stress41.134
SRR1811619moderate drought stress40.922

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.228
DRR006520Root Summer glycyrrhizin high producing strain28.886
DRR006521Root Winter glycyrrhizin high producing strain24.153
DRR006522Root Winter glycyrrhizin high producing strain23.299
DRR006523Root Summer glycyrrhizin low producing strain33.058
DRR006524Root Summer glycyrrhizin low producing strain32.771
DRR006525Leaf Summer glycyrrhizin high producing strain13.408
DRR006526Leaf Summer glycyrrhizin high producing strain13.335

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.848
SRR2868004Drought Stress(Tissue:root)48.713
SRR2967015Control (Tissue:root)52.849

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.992
SRR9715740Leave30.590
SRR9715741Leave28.921
SRR9715739Root23.460
SRR9715742Root39.628
SRR9715743Root35.091

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.944
SRR8749028MeJA induced 9h27.017
SRR8749029MeJA induced 9h13.267
SRR8749030Uninduced22.668
SRR8749031Uninduced12.167
SRR8749032Uninduced7.711

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root47.844
SRR8400027Control-Root46.500

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved