Gene detail information of Glyur000189s00009599.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G54610.30Protein kinase superfamily protein
NRXP_003594001.10hypothetical protein MTR_2g020210 [Medicago truncatula]
COGYP_003371239.11.00E-23serine/threonine protein kinase [Pirellula staleyi DSM 6068]
Swissprottr|Q9ZVM9|Y1461_ARATH0Probable serine/threonine-protein kinase At1g54610
trEMBLtr|G7ISJ5|G7ISJ5_MEDTR0Cyclin-dependent kinase {ECO:0000313|EMBL:AES64252.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001897647781980+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000189s00009599.1PF00069.20Pkinase1033878.90E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.196
SRR1783600control12.249
SRR1783602moderate drought stress13.003
SRR1811619moderate drought stress13.111

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.165
DRR006520Root Summer glycyrrhizin high producing strain10.922
DRR006521Root Winter glycyrrhizin high producing strain7.340
DRR006522Root Winter glycyrrhizin high producing strain7.105
DRR006523Root Summer glycyrrhizin low producing strain11.071
DRR006524Root Summer glycyrrhizin low producing strain11.014
DRR006525Leaf Summer glycyrrhizin high producing strain11.572
DRR006526Leaf Summer glycyrrhizin high producing strain11.368

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.467
SRR2868004Drought Stress(Tissue:root)24.915
SRR2967015Control (Tissue:root)30.986

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.375
SRR9715740Leave12.768
SRR9715741Leave15.469
SRR9715739Root7.048
SRR9715742Root14.948
SRR9715743Root12.754

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.724
SRR8749028MeJA induced 9h11.125
SRR8749029MeJA induced 9h8.898
SRR8749030Uninduced6.234
SRR8749031Uninduced4.384
SRR8749032Uninduced5.674

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root24.713
SRR8400027Control-Root27.435

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved