Gene detail information of Glyur000189s00009609.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G18700.10Protein kinase family protein with ARM repeat domain
NRXP_003542912.10PREDICTED: serine/threonine-protein kinase ULK4-like [Glycine max]
COGYP_002759750.16.00E-32putative protein kinase [Gemmatimonas aurantiaca T-27]
Swissprottr|Q2QAV0|TIO_ARATH1.00E-48Serine/threonine-protein kinase TIO
trEMBLtr|I1M1B4|I1M1B4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G28570.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00189131900138886-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005488  binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000189s00009609.1PF00069.20Pkinase42569.70E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.460
SRR1783600control3.586
SRR1783602moderate drought stress2.841
SRR1811619moderate drought stress2.865

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.990
DRR006520Root Summer glycyrrhizin high producing strain4.848
DRR006521Root Winter glycyrrhizin high producing strain0.595
DRR006522Root Winter glycyrrhizin high producing strain0.584
DRR006523Root Summer glycyrrhizin low producing strain2.071
DRR006524Root Summer glycyrrhizin low producing strain2.125
DRR006525Leaf Summer glycyrrhizin high producing strain0.717
DRR006526Leaf Summer glycyrrhizin high producing strain0.686

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.479
SRR2868004Drought Stress(Tissue:root)7.858
SRR2967015Control (Tissue:root)8.433

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.702
SRR9715740Leave0.426
SRR9715741Leave0.891
SRR9715739Root1.250
SRR9715742Root2.296
SRR9715743Root2.411

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.206
SRR8749028MeJA induced 9h10.511
SRR8749029MeJA induced 9h4.207
SRR8749030Uninduced2.266
SRR8749031Uninduced2.006
SRR8749032Uninduced1.192

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.378
SRR8400027Control-Root8.678

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved