Gene detail information of Glyur000189s00009624.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67710.1 | 9.00E-94 | response regulator 11 |
| NR | XP_003524159.1 | 0 | PREDICTED: two-component response regulator ARR11-like isoform X1 [Glycine max] |
| COG | NP_683154.1 | 6.00E-16 | two-component response regulator [Thermosynechococcus elongatus BP-1] |
| Swissprot | tr|Q9FXD6|ARR11_ARATH | 3.00E-117 | Two-component response regulator ARR11 |
| trEMBL | tr|I1K3I8|I1K3I8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G27670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00189 | 225648 | 229687 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ARR-B |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000189s00009624.1 | PF00072.19 | Response_reg | 20 | 128 | 1.80E-21 |
| Glyur000189s00009624.1 | PF00249.26 | Myb_DNA-binding | 202 | 251 | 7.40E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.505 |
| SRR1783600 | control | 5.624 |
| SRR1783602 | moderate drought stress | 1.865 |
| SRR1811619 | moderate drought stress | 1.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.721 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.275 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.282 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.304 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.296 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.396 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 10.305 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.670 |
| SRR2967015 | Control (Tissue:root) | 14.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.137 |
| SRR9715740 | Leave | 4.208 |
| SRR9715741 | Leave | 1.296 |
| SRR9715739 | Root | 0.181 |
| SRR9715742 | Root | 2.078 |
| SRR9715743 | Root | 2.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.879 |
| SRR8749028 | MeJA induced 9h | 1.516 |
| SRR8749029 | MeJA induced 9h | 1.073 |
| SRR8749030 | Uninduced | 0.508 |
| SRR8749031 | Uninduced | 0.392 |
| SRR8749032 | Uninduced | 0.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.298 |
| SRR8400027 | Control-Root | 2.437 |