Gene detail

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Gene detail information of Glyur000189s00009626.1

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G67720.1	Leucine-rich repeat protein kinase family protein
NR	XP_006584598.1	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720-like isoform X2 [Glycine max]
Swissprot	tr\|C0LGI2\|Y1677_ARATH	Probable LRR receptor-like serine/threonine-protein kinase At1g67720 (Precursor)
trEMBL	tr\|K7L5V0\|K7L5V0_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G10640.2}

Sequence

Transcript Sequence

>Glyur000189s00009626.1
GCTAAACTGACTCAAACAAACAGTAAATGTAATCAAACCAATCACTTGATATCCTTGAAGCATAACTATTAGAGCTAGTTTTGTTNTTTCCTTACCTTGATGGGTTTATTTTCTCTCTTTCTGGTTGCACTACTTCCTCTATTGAAATCATTAGCAGTTTGCCAACTTGAAGAATTTGTTAGCATTGACTGTGGAGGGACAAGTAATTACATTGATAGCAACACGGGGTTGGCATGGATTACAGANTCTGGTATCATGCAACATGGCATTCCAGTGGAAGTAGAGAGTAGTCCAAATGGAAGCGTGGTGCAGTATTATCAAAGGCGCAGAGACTTTCCCATAGACAACAGGAAATACTGCTACACACTGAGCACAGAGGAGAGAAGAAGGTATTTGGTAAGAGCAACGTTTCAGTATGGCAGCTTGGAGAATGGNGACACTTACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAATGGGCTACTGTGTCAATATATGATGCCTCAAGAGTGTATGTTAAGGAAATGATCATCAGGGCACCCTCTAATTCCATTGATGTCTGCATGTGCTGTGCTACAACTGGTTCTCCTTTCATATCTACTCTTGAGCTAAGGCCCTTGAATCTTTCAATGTACCCGNATGACCCATATGATAGAATTTGGGATTCTGATCTTATTAGAAGGCAAAATTATCTTGTTGGAGTGGCCCCAGGCACAGAAAGAATTAGAACAACAAAGAACATAGAAATAGAGACAAGAGAATTCCCACCTGTTAAAGTTATGCAAACTGCAGTTGTTGGCACAAAAGGAGNACTCAGCTACCGATTAAACTTAGAAGACTTCCCTGCCAATGCACGAGCTTATGCATATTTTGCAGAGATTGAAGATCTGGGTGAGAATGAGACGCGGAAATTCAAATTGGAGCAGCCTTATATACCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACACTCTATATGAACCAAGTTACATGAATGTGAGTCTCGAATTTGTTCTTTCATTCTCCTTTGTGATGACCCCGGATTCTACTCGAGGACCTCTTCTAAATGCATTGGAGATAAGCAGATATGTAGAGATTGCTTCAAAGACCAACAGGCAAGATTCAACTGTTGTAAATGCATTTGGATTCTTGTCTGCTGAAAGTTTCCAAACAAATGAAGGGGATCCTTGTGTTCCAACTCCCTGGGAATGGGTAAATTGTAGCACTACACCACCAAGAATTACAAAAATAATTCTTTCAAGAAGGAATCTGAAGGGTGAAATTCCACCTGAGCTCAACAACATGGACGCATTGACAGAGTTGTGGTTAGATGGCAACTTGCTCACAGGACCACTACCTGACATGAGCAATCTTATAAATCTAAAGATTGTGTTCATACNGAATAACNCATTTAGTGGGGAAATACCAGCCNGAATAGTATCTGGTAAAATCATTTTCAACTATGATGGTAATCCTGGACTATATAGAGGAAACAAGAAACATTTTAAGTNGATACTGGGAATTTCAATTGGAGTACTAGTGATTCTATTAATATTGTTCTTAGGGAGTTTGGTGCTATTGCATAATATGAGNAGAAAGACATCTTATCAGAAACGTGAGGAAAATGGAATTTCTGGACGCACTAACAATAAANCTTTAAATGCTTACTCATTAGTTTGGGGTGGAAATGTAATGGATGAAGGTACTACATGCTATGTTACACTCTCAGAGTTGAAAGAAGCTACTGACAATTTTTCAAAGAAAATTGGCAAAGGAAGTTTTGGATCTGTGTACTANGGGAAAATGAGAGACGGAAAAGAGGTGGCGGTAAAGAGTATGACCGATTCATCTAGCCATGGGAATCAGCAATTTGTTAATGAGGTAGCCCTCCTATCAAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGTGAAGAAGAGTGTCAGCATCTTCTGGTTTATGGGTATATGCACAATGGCACTTTAAGGGATCACATTCATGAATGTTCCAAGAAGAAGAACTTAGACTGGTTAGCGCGTCTTCGAATTGCAGAAGATGCAGCTAAAGGTTGGTACTATGCAAATCAGCAATTGACAGAAAAGAGTGATGTGTACAGTTTTGGAGTTGTTCTGCTGGAACTGATATCTGGAAGAAAGCCTGTGTCATCAGATTCAGAAGATTATNGTGCTGAAATGAACATTGTTCACTGGGCAAAATCCTTAATTCGTAAAGGAGATGTGATGAGCCTCATTGACCCTTCTGTAGCCGGGAATGTAAAAACTGAGTNCATTTGGAGGGTGGTTGAAATAGCCATGCAATGTGTGGAACAACATGGTGCATCCAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAGGGGACAGAAAATAAGCTAAAATCATCATCAACATGTAGTAGTTCAAAACCACACTCTTCANGGAAAACATTGCTCACAAGCTTTCTTGAAATTGAGAGCCCTGACTTGTCTAATGGTTGCGTCCCATCAGCTACATAAATTGGACCTAACTTGTGTTGGTGGAATTTTGTTTGTGTATTTATTTTTCTCATTCCGCTAATATGTTTACACCAGTAGCACTGATTAGTGACAACACATACCTTCAAATCTTAGAACCAATGAAATGGTAATCTTTTTCCTCCATATTTGGCTACTTTGTTTTGGTCTTTAATTGTGTATTCCCACTGGTATAGCTGTGTTGGAGTAAGTGGTTAGATAGAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00189	235777	241529	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.8.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000189s00009626.1	PF12819.2	Malectin_like	29	180	1.50E-38
Glyur000189s00009626.1	PF07714.12	Pkinase_Tyr	559	671	1.80E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.869
SRR1783600	control	4.814
SRR1783602	moderate drought stress	3.830
SRR1811619	moderate drought stress	3.927

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.912
DRR006520	Root Summer glycyrrhizin high producing strain	7.852
DRR006521	Root Winter glycyrrhizin high producing strain	0.893
DRR006522	Root Winter glycyrrhizin high producing strain	0.743
DRR006523	Root Summer glycyrrhizin low producing strain	6.022
DRR006524	Root Summer glycyrrhizin low producing strain	6.138
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.934
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.896

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	4.250
SRR2868004	Drought Stress(Tissue:root)	2.914
SRR2967015	Control (Tissue:root)	3.900

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.423
SRR9715740	Leave	0.083
SRR9715741	Leave	0.089
SRR9715739	Root	0.373
SRR9715742	Root	1.624
SRR9715743	Root	1.285

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.539
SRR8749028	MeJA induced 9h	0.165
SRR8749029	MeJA induced 9h	0.214
SRR8749030	Uninduced	0.062
SRR8749031	Uninduced	0.295
SRR8749032	Uninduced	0.146

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	16.500
SRR8400027	Control-Root	20.165