Gene detail information of Glyur000190s00015716.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G08850.10HEAT repeat ;WD domain, G-beta repeat protein protein
NRXP_007140148.10hypothetical protein PHAVU_008G087800g [Phaseolus vulgaris]
COGYP_001514572.14.00E-08WD repeat-containing protein [Acaryochloris marina MBIC11017]
Swissprottr|Q93YQ1|RTOR1_ARATH0Regulatory-associated protein of TOR 1
trEMBLtr|V7B2P2|V7B2P2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW12142.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001902395938118+


Gene family

Gene familysubfamily
Ubiquitin FamilyDWD


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0031929  TOR signaling


cellular_component

GO:0031931  TORC1 complex


molecular_function

GO:0005488  binding

GO:0005515  protein binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000190s00015716.1PF14538.1Raptor_N1142661.40E-70
Glyur000190s00015716.1PF13646.1HEAT_26577423.10E-06
Glyur000190s00015716.1PF00400.27WD40128113140.026


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.811
SRR1783600control17.810
SRR1783602moderate drought stress15.875
SRR1811619moderate drought stress15.826

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain15.874
DRR006520Root Summer glycyrrhizin high producing strain14.971
DRR006521Root Winter glycyrrhizin high producing strain19.065
DRR006522Root Winter glycyrrhizin high producing strain17.775
DRR006523Root Summer glycyrrhizin low producing strain16.311
DRR006524Root Summer glycyrrhizin low producing strain16.343
DRR006525Leaf Summer glycyrrhizin high producing strain14.131
DRR006526Leaf Summer glycyrrhizin high producing strain13.235

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.031
SRR2868004Drought Stress(Tissue:root)33.235
SRR2967015Control (Tissue:root)31.154

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave15.018
SRR9715740Leave17.087
SRR9715741Leave17.445
SRR9715739Root10.375
SRR9715742Root25.058
SRR9715743Root21.995

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h18.099
SRR8749028MeJA induced 9h17.235
SRR8749029MeJA induced 9h12.531
SRR8749030Uninduced11.637
SRR8749031Uninduced10.386
SRR8749032Uninduced9.184

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.475
SRR8400027Control-Root22.763

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved