Gene detail information of Glyur000190s00015737.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07100.15.00E-54WRKY DNA-binding protein 26
NRXP_007140176.11.45E-173hypothetical protein PHAVU_008G090300g [Phaseolus vulgaris]
Swissprottr|Q8S8P5|WRK33_ARATH3.00E-78Probable WRKY transcription factor 33
trEMBLtr|V7B3Q5|V7B3Q5_PHAVU5.00E-174Uncharacterized protein {ECO:0000313|EMBL:ESW12170.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00190205895210047+


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000190s00015737.1PF03106.10WRKY2032315.00E-14
Glyur000190s00015737.1PF03106.10WRKY3293876.20E-30


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.225
SRR1783600control2.182
SRR1783602moderate drought stress3.796
SRR1811619moderate drought stress3.708

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain22.186
DRR006520Root Summer glycyrrhizin high producing strain22.832
DRR006521Root Winter glycyrrhizin high producing strain1.275
DRR006522Root Winter glycyrrhizin high producing strain1.096
DRR006523Root Summer glycyrrhizin low producing strain104.745
DRR006524Root Summer glycyrrhizin low producing strain102.922
DRR006525Leaf Summer glycyrrhizin high producing strain20.857
DRR006526Leaf Summer glycyrrhizin high producing strain20.700

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.974
SRR2868004Drought Stress(Tissue:root)73.251
SRR2967015Control (Tissue:root)74.221

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave108.446
SRR9715740Leave136.772
SRR9715741Leave143.679
SRR9715739Root11.229
SRR9715742Root74.634
SRR9715743Root62.388

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.364
SRR8749028MeJA induced 9h1.065
SRR8749029MeJA induced 9h0.537
SRR8749030Uninduced20.941
SRR8749031Uninduced3.804
SRR8749032Uninduced1.803

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.678
SRR8400027Control-Root64.918

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved