Gene detail information of Glyur000191s00015614.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26030.23.00E-155ferrochelatase 1
NRKHN29732.10Ferrochelatase-2, chloroplastic [Glycine soja]
COGYP_007167757.17.00E-131ferrochelatase [Halothece sp. PCC 7418]
Swissprottr|P42044|HEMH_CUCSA0Ferrochelatase-2, chloroplastic (Precursor)
trEMBLtr|I1JTV8|I1JTV8_SOYBN0Ferrochelatase {ECO:0000256|RuleBase:RU000607}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001914523348908+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01772hemH, FECH EC:4.99.1.1 4.99.1.9 Porphyrin and chlorophyll metabolism map00860


Gene Ontology

biological_process

GO:0006783  heme biosynthetic process


molecular_function

GO:0004325  ferrochelatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000191s00015614.1PF00762.14Ferrochelatase1084155.50E-94


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control26.509
SRR1783600control26.462
SRR1783602moderate drought stress19.446
SRR1811619moderate drought stress18.899

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain49.680
DRR006520Root Summer glycyrrhizin high producing strain49.411
DRR006521Root Winter glycyrrhizin high producing strain23.139
DRR006522Root Winter glycyrrhizin high producing strain22.763
DRR006523Root Summer glycyrrhizin low producing strain79.019
DRR006524Root Summer glycyrrhizin low producing strain79.299
DRR006525Leaf Summer glycyrrhizin high producing strain36.200
DRR006526Leaf Summer glycyrrhizin high producing strain36.875

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)49.405
SRR2868004Drought Stress(Tissue:root)59.975
SRR2967015Control (Tissue:root)48.438

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave144.903
SRR9715740Leave89.482
SRR9715741Leave172.170
SRR9715739Root40.863
SRR9715742Root89.841
SRR9715743Root79.006

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h87.805
SRR8749028MeJA induced 9h81.675
SRR8749029MeJA induced 9h69.172
SRR8749030Uninduced192.153
SRR8749031Uninduced107.785
SRR8749032Uninduced94.121

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.023
SRR8400027Control-Root62.605

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved