Gene detail information of Glyur000191s00015616.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G11770.11.00E-82NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial
NRCAN67285.11.13E-133hypothetical protein VITISV_021597 [Vitis vinifera]
COGYP_003550469.11.00E-90NADH:ubiquinone oxidoreductase 20 kD subunit-like protein [Candidatus Puniceispirillum marinum IMCC1322]
Swissprottr|P42027|NDUS7_BRAOL1.00E-126NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial (Precursor)
trEMBLtr|A5AY34|A5AY34_VITVI4.00E-134Putative uncharacterized protein {ECO:0000313|EMBL:CAN67285.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold001915651161307-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03940NDUFS7 EC:1.6.5.3 1.6.99.3 Oxidative phosphorylation map00190
Alzheimer's diseasemap05010
Parkinson's diseasemap05012
Huntington's diseasemap05016
Non-alcoholic fatty liver disease (NAFLD)map04932


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0008137  NADH dehydrogenase (ubiquinone) activity

GO:0048038  quinone binding

GO:0051536  iron-sulfur cluster binding

GO:0051539  4 iron, 4 sulfur cluster binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000191s00015616.1PF01058.17Oxidored_q62463555.40E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control186.463
SRR1783600control186.905
SRR1783602moderate drought stress151.327
SRR1811619moderate drought stress150.452

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain123.748
DRR006520Root Summer glycyrrhizin high producing strain121.871
DRR006521Root Winter glycyrrhizin high producing strain170.744
DRR006522Root Winter glycyrrhizin high producing strain165.898
DRR006523Root Summer glycyrrhizin low producing strain117.008
DRR006524Root Summer glycyrrhizin low producing strain117.126
DRR006525Leaf Summer glycyrrhizin high producing strain155.241
DRR006526Leaf Summer glycyrrhizin high producing strain153.240

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)132.213
SRR2868004Drought Stress(Tissue:root)108.674
SRR2967015Control (Tissue:root)101.603

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave124.877
SRR9715740Leave129.041
SRR9715741Leave113.585
SRR9715739Root133.800
SRR9715742Root96.950
SRR9715743Root94.728

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h95.337
SRR8749028MeJA induced 9h76.541
SRR8749029MeJA induced 9h85.962
SRR8749030Uninduced56.650
SRR8749031Uninduced40.187
SRR8749032Uninduced62.814

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root89.748
SRR8400027Control-Root79.404

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved