Gene detail information of Glyur000191s00015618.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32980.1 | 4.00E-77 | homeobox gene 1 |
| NR | XP_006581286.1 | 0 | PREDICTED: homeobox protein ATH1-like isoform X2 [Glycine max] |
| Swissprot | tr|P48731|ATH1_ARATH | 4.00E-100 | Homeobox protein ATH1 |
| trEMBL | tr|K7KT73|K7KT73_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G05430.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 71233 | 74577 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
| EAR motif-containing Proteins | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015618.1 | PF07526.6 | POX | 198 | 334 | 3.90E-24 |
| Glyur000191s00015618.1 | PF05920.6 | Homeobox_KN | 397 | 427 | 3.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.073 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.129 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.086 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.124 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.123 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.109 |
| SRR2967015 | Control (Tissue:root) | 0.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.103 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.163 |
| SRR9715739 | Root | 0.029 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.062 |
| SRR8749028 | MeJA induced 9h | 0.007 |
| SRR8749029 | MeJA induced 9h | 0.017 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.055 |
| SRR8400027 | Control-Root | 0.113 |