Gene detail information of Glyur000191s00015619.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56840.1 | 1.00E-27 | myb-like transcription factor family protein |
| NR | XP_003603145.1 | 1.60E-71 | MYB transcription factor [Medicago truncatula] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 2.00E-22 | Transcription factor DIVARICATA |
| trEMBL | tr|G7J7M5|G7J7M5_MEDTR | 6.00E-72 | MYB-like transcription factor family protein {ECO:0000313|EMBL:AES73396.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 79788 | 81093 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015619.1 | PF00249.26 | Myb_DNA-binding | 103 | 148 | 1.40E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.407 |
| SRR1783600 | control | 0.329 |
| SRR1783602 | moderate drought stress | 0.152 |
| SRR1811619 | moderate drought stress | 0.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.761 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.720 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.542 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.579 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.244 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.096 |
| SRR2967015 | Control (Tissue:root) | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.087 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.806 |
| SRR8749028 | MeJA induced 9h | 0.196 |
| SRR8749029 | MeJA induced 9h | 0.550 |
| SRR8749030 | Uninduced | 0.059 |
| SRR8749031 | Uninduced | 0.367 |
| SRR8749032 | Uninduced | 0.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.923 |
| SRR8400027 | Control-Root | 0.972 |