Gene detail information of Glyur000191s00015633.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G53050.1 | 6.00E-103 | Protein kinase superfamily protein |
| NR | AES62313.2 | 0 | cyclin-dependent kinase [Medicago truncatula] |
| COG | YP_003371239.1 | 1.00E-25 | serine/threonine protein kinase [Pirellula staleyi DSM 6068] |
| Swissprot | tr|Q9ZVM9|Y1461_ARATH | 2.00E-127 | Probable serine/threonine-protein kinase At1g54610 |
| trEMBL | tr|G7IBV9|G7IBV9_MEDTR | 0 | Cyclin-dependent kinase {ECO:0000313|EMBL:AES62313.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 162469 | 167704 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:4.5.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015633.1 | PF00069.20 | Pkinase | 150 | 411 | 1.70E-61 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.692 |
| SRR1783600 | control | 9.736 |
| SRR1783602 | moderate drought stress | 5.581 |
| SRR1811619 | moderate drought stress | 5.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.346 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.715 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.110 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.945 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 38.576 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 38.688 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.027 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.227 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.980 |
| SRR2868004 | Drought Stress(Tissue:root) | 15.826 |
| SRR2967015 | Control (Tissue:root) | 11.442 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.875 |
| SRR9715740 | Leave | 3.144 |
| SRR9715741 | Leave | 4.830 |
| SRR9715739 | Root | 8.047 |
| SRR9715742 | Root | 26.862 |
| SRR9715743 | Root | 23.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 41.503 |
| SRR8749028 | MeJA induced 9h | 57.482 |
| SRR8749029 | MeJA induced 9h | 41.826 |
| SRR8749030 | Uninduced | 59.751 |
| SRR8749031 | Uninduced | 20.397 |
| SRR8749032 | Uninduced | 13.254 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 9.195 |
| SRR8400027 | Control-Root | 15.131 |