Gene detail information of Glyur000191s00015640.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G71695.11.00E-101Peroxidase superfamily protein
NRXP_007143568.10hypothetical protein PHAVU_007G082600g [Phaseolus vulgaris]
Swissprottr|Q96520|PER12_ARATH5.00E-126Peroxidase 12 (Precursor)
trEMBLtr|V7BCG4|V7BCG4_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW15562.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00191212979216176-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000191s00015640.1PF00141.18peroxidase582957.00E-69


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.374
SRR1783600control32.616
SRR1783602moderate drought stress36.252
SRR1811619moderate drought stress36.789

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.219
DRR006520Root Summer glycyrrhizin high producing strain45.710
DRR006521Root Winter glycyrrhizin high producing strain28.758
DRR006522Root Winter glycyrrhizin high producing strain27.375
DRR006523Root Summer glycyrrhizin low producing strain53.098
DRR006524Root Summer glycyrrhizin low producing strain53.017
DRR006525Leaf Summer glycyrrhizin high producing strain24.938
DRR006526Leaf Summer glycyrrhizin high producing strain24.987

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)181.969
SRR2868004Drought Stress(Tissue:root)184.159
SRR2967015Control (Tissue:root)173.888

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave45.144
SRR9715740Leave13.226
SRR9715741Leave21.163
SRR9715739Root19.606
SRR9715742Root154.919
SRR9715743Root135.259

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.894
SRR8749028MeJA induced 9h0.525
SRR8749029MeJA induced 9h0.929
SRR8749030Uninduced0.117
SRR8749031Uninduced0.064
SRR8749032Uninduced0.232

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.425
SRR8400027Control-Root61.399

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved