Gene detail information of Glyur000191s00015641.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76710.23.00E-144SET domain group 26
NRXP_007143566.10hypothetical protein PHAVU_007G082400g [Phaseolus vulgaris]
COGYP_001154790.12.00E-22nuclear protein SET [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1]
Swissprottr|Q84WW6|ASHH1_ARATH2.00E-177Histone-lysine N-methyltransferase ASHH1
trEMBLtr|V7BDB6|V7BDB6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW15560.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00191228356231461-


Gene family

Gene familysubfamily
Transcription Factors FamilySET


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0005515  protein binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000191s00015641.1PF00856.23SET221283.40E-25


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.506
SRR1783600control12.469
SRR1783602moderate drought stress19.573
SRR1811619moderate drought stress19.285

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.309
DRR006520Root Summer glycyrrhizin high producing strain24.205
DRR006521Root Winter glycyrrhizin high producing strain49.817
DRR006522Root Winter glycyrrhizin high producing strain47.571
DRR006523Root Summer glycyrrhizin low producing strain27.098
DRR006524Root Summer glycyrrhizin low producing strain27.185
DRR006525Leaf Summer glycyrrhizin high producing strain21.300
DRR006526Leaf Summer glycyrrhizin high producing strain21.267

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.156
SRR2868004Drought Stress(Tissue:root)39.599
SRR2967015Control (Tissue:root)43.792

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.861
SRR9715740Leave24.721
SRR9715741Leave26.343
SRR9715739Root0.754
SRR9715742Root10.033
SRR9715743Root7.191

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h47.082
SRR8749028MeJA induced 9h47.571
SRR8749029MeJA induced 9h43.844
SRR8749030Uninduced63.709
SRR8749031Uninduced41.626
SRR8749032Uninduced55.602

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.337
SRR8400027Control-Root32.550

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved